Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CCDC187A0A096LP49 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.02■□□□□ -0
CCDC187A0A096LP49 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CCDC187A0A096LP49 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
CCDC187A0A096LP49 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.02■□□□□ -0
CCDC187A0A096LP49 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
CCDC187A0A096LP49 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CCDC187A0A096LP49 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.02■□□□□ -0
CCDC187A0A096LP49 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
CCDC187A0A096LP49 AC046158.3-201ENST00000624947 2558 ntBASIC15.02■□□□□ -0
CCDC187A0A096LP49 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CCDC187A0A096LP49 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
CCDC187A0A096LP49 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.02■□□□□ -0
CCDC187A0A096LP49 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
CCDC187A0A096LP49 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CCDC187A0A096LP49 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CCDC187A0A096LP49 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.02■□□□□ -0
CCDC187A0A096LP49 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.02■□□□□ -0
CCDC187A0A096LP49 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.02■□□□□ -0
CCDC187A0A096LP49 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
CCDC187A0A096LP49 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
CCDC187A0A096LP49 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CCDC187A0A096LP49 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.02■□□□□ -0
CCDC187A0A096LP49 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC15.02■□□□□ -0
CCDC187A0A096LP49 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CCDC187A0A096LP49 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.02■□□□□ -0
CCDC187A0A096LP49 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.02■□□□□ -0
CCDC187A0A096LP49 AC136604.1-201ENST00000418535 575 ntBASIC15.02■□□□□ -0
CCDC187A0A096LP49 BCYRN1-201ENST00000418539 200 ntBASIC15.02■□□□□ -0
CCDC187A0A096LP49 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CCDC187A0A096LP49 DERL2-202ENST00000570848 657 ntTSL 5 BASIC15.02■□□□□ -0
CCDC187A0A096LP49 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.02■□□□□ -0
CCDC187A0A096LP49 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.02■□□□□ -0
CCDC187A0A096LP49 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CCDC187A0A096LP49 AL450472.2-201ENST00000603663 1156 ntBASIC15.02■□□□□ -0
CCDC187A0A096LP49 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.02□□□□□ -0.01
CCDC187A0A096LP49 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
CCDC187A0A096LP49 MST1L-201ENST00000442552 2185 ntBASIC15.02□□□□□ -0.01
CCDC187A0A096LP49 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC187A0A096LP49 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC187A0A096LP49 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC187A0A096LP49 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
CCDC187A0A096LP49 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC187A0A096LP49 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC187A0A096LP49 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC187A0A096LP49 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC187A0A096LP49 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CCDC187A0A096LP49 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.01□□□□□ -0.01
CCDC187A0A096LP49 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC187A0A096LP49 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
CCDC187A0A096LP49 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC187A0A096LP49 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC187A0A096LP49 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.01□□□□□ -0.01
CCDC187A0A096LP49 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC187A0A096LP49 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC187A0A096LP49 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC187A0A096LP49 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC187A0A096LP49 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CCDC187A0A096LP49 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CCDC187A0A096LP49 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC187A0A096LP49 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC187A0A096LP49 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC187A0A096LP49 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC187A0A096LP49 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC187A0A096LP49 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.01□□□□□ -0.01
CCDC187A0A096LP49 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC187A0A096LP49 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.01□□□□□ -0.01
CCDC187A0A096LP49 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC187A0A096LP49 AC093433.1-201ENST00000458048 571 ntBASIC15.01□□□□□ -0.01
CCDC187A0A096LP49 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.01□□□□□ -0.01
CCDC187A0A096LP49 AC108725.1-201ENST00000495472 409 ntBASIC15.01□□□□□ -0.01
CCDC187A0A096LP49 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.01□□□□□ -0.01
CCDC187A0A096LP49 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.01□□□□□ -0.01
CCDC187A0A096LP49 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.01□□□□□ -0.01
CCDC187A0A096LP49 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.01□□□□□ -0.01
CCDC187A0A096LP49 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.01□□□□□ -0.01
CCDC187A0A096LP49 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15.01□□□□□ -0.01
CCDC187A0A096LP49 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.01□□□□□ -0.01
CCDC187A0A096LP49 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.01□□□□□ -0.01
CCDC187A0A096LP49 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC187A0A096LP49 AC244093.1-201ENST00000610837 814 ntBASIC15.01□□□□□ -0.01
CCDC187A0A096LP49 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.01□□□□□ -0.01
CCDC187A0A096LP49 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.01□□□□□ -0.01
CCDC187A0A096LP49 AC005252.2-201ENST00000624630 1141 ntBASIC15.01□□□□□ -0.01
CCDC187A0A096LP49 RHOXF1P1-202ENST00000635473 501 ntBASIC15.01□□□□□ -0.01
CCDC187A0A096LP49 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC187A0A096LP49 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC187A0A096LP49 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC187A0A096LP49 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.01□□□□□ -0.01
CCDC187A0A096LP49 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC187A0A096LP49 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC187A0A096LP49 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC187A0A096LP49 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC187A0A096LP49 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC187A0A096LP49 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.01□□□□□ -0.01
CCDC187A0A096LP49 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC187A0A096LP49 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC187A0A096LP49 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC187A0A096LP49 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC187A0A096LP49 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms