Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
UBE2D4Q9Y2X8 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
UBE2D4Q9Y2X8 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
UBE2D4Q9Y2X8 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
UBE2D4Q9Y2X8 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
UBE2D4Q9Y2X8 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC11.15□□□□□ -0.62
UBE2D4Q9Y2X8 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
UBE2D4Q9Y2X8 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC11.15□□□□□ -0.62
UBE2D4Q9Y2X8 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC11.15□□□□□ -0.62
UBE2D4Q9Y2X8 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC11.15□□□□□ -0.62
UBE2D4Q9Y2X8 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
UBE2D4Q9Y2X8 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC11.15□□□□□ -0.62
UBE2D4Q9Y2X8 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.63
UBE2D4Q9Y2X8 TKT-202ENST00000423516 2075 ntTSL 2 BASIC11.15□□□□□ -0.63
UBE2D4Q9Y2X8 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
UBE2D4Q9Y2X8 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.63
UBE2D4Q9Y2X8 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
UBE2D4Q9Y2X8 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.63
UBE2D4Q9Y2X8 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.63
UBE2D4Q9Y2X8 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 CELP-203ENST00000624767 2414 ntTSL 5 BASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 OR2I1P-210ENST00000642037 4691 ntBASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 INIP-202ENST00000374236 874 ntTSL 2 BASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 FAM210CP-201ENST00000445714 574 ntBASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 AC109635.5-201ENST00000533593 962 ntBASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 CLEC4GP1-201ENST00000596555 870 ntBASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 AL365209.1-201ENST00000624418 6473 ntBASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 GSN-215ENST00000545652 2428 ntTSL 2 BASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
UBE2D4Q9Y2X8 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 LRRFIP1P1-201ENST00000498774 2246 ntBASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 GPI-205ENST00000586425 1799 ntTSL 5 BASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 AC073439.1-201ENST00000624121 1774 ntBASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms