Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.37■□□□□ 0.21
CDCA3Q99618 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDCA3Q99618 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.37■□□□□ 0.21
CDCA3Q99618 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.37■□□□□ 0.21
CDCA3Q99618 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CDCA3Q99618 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDCA3Q99618 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDCA3Q99618 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDCA3Q99618 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDCA3Q99618 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDCA3Q99618 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDCA3Q99618 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.36■□□□□ 0.21
CDCA3Q99618 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDCA3Q99618 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
CDCA3Q99618 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
CDCA3Q99618 AC079178.1-201ENST00000420915 656 ntBASIC16.36■□□□□ 0.21
CDCA3Q99618 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
CDCA3Q99618 CNN2P10-201ENST00000443067 918 ntBASIC16.36■□□□□ 0.21
CDCA3Q99618 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC16.36■□□□□ 0.21
CDCA3Q99618 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.36■□□□□ 0.21
CDCA3Q99618 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC16.36■□□□□ 0.21
CDCA3Q99618 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDCA3Q99618 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC16.36■□□□□ 0.21
CDCA3Q99618 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.36■□□□□ 0.21
CDCA3Q99618 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC16.36■□□□□ 0.21
CDCA3Q99618 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC16.36■□□□□ 0.21
CDCA3Q99618 AC016629.1-201ENST00000596579 586 ntBASIC16.36■□□□□ 0.21
CDCA3Q99618 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC16.36■□□□□ 0.21
CDCA3Q99618 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC16.36■□□□□ 0.21
CDCA3Q99618 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC16.36■□□□□ 0.21
CDCA3Q99618 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.36■□□□□ 0.21
CDCA3Q99618 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.36■□□□□ 0.21
CDCA3Q99618 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.36■□□□□ 0.21
CDCA3Q99618 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDCA3Q99618 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDCA3Q99618 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.36■□□□□ 0.21
CDCA3Q99618 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDCA3Q99618 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.36■□□□□ 0.21
CDCA3Q99618 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.36■□□□□ 0.21
CDCA3Q99618 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDCA3Q99618 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.36■□□□□ 0.21
CDCA3Q99618 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDCA3Q99618 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.35■□□□□ 0.21
CDCA3Q99618 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDCA3Q99618 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDCA3Q99618 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDCA3Q99618 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDCA3Q99618 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDCA3Q99618 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDCA3Q99618 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDCA3Q99618 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.35■□□□□ 0.21
CDCA3Q99618 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDCA3Q99618 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CDCA3Q99618 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.35■□□□□ 0.21
CDCA3Q99618 KLF2P2-201ENST00000416807 1039 ntBASIC16.35■□□□□ 0.21
CDCA3Q99618 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC16.35■□□□□ 0.21
CDCA3Q99618 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.35■□□□□ 0.21
CDCA3Q99618 HIST2H2BC-201ENST00000498492 580 ntBASIC16.35■□□□□ 0.21
CDCA3Q99618 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDCA3Q99618 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CDCA3Q99618 NKG7-204ENST00000595217 816 ntTSL 2 BASIC16.35■□□□□ 0.21
CDCA3Q99618 NDUFV2P1-201ENST00000596415 907 ntBASIC16.35■□□□□ 0.21
CDCA3Q99618 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC16.35■□□□□ 0.21
CDCA3Q99618 AC138627.1-207ENST00000641560 1006 ntBASIC16.35■□□□□ 0.21
CDCA3Q99618 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CDCA3Q99618 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC16.35■□□□□ 0.21
CDCA3Q99618 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDCA3Q99618 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDCA3Q99618 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.35■□□□□ 0.21
CDCA3Q99618 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDCA3Q99618 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDCA3Q99618 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDCA3Q99618 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDCA3Q99618 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDCA3Q99618 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDCA3Q99618 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDCA3Q99618 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.34■□□□□ 0.21
CDCA3Q99618 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.34■□□□□ 0.21
CDCA3Q99618 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CDCA3Q99618 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDCA3Q99618 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDCA3Q99618 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDCA3Q99618 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDCA3Q99618 RNF216P1-203ENST00000404404 2427 ntBASIC16.34■□□□□ 0.21
CDCA3Q99618 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CDCA3Q99618 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CDCA3Q99618 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDCA3Q99618 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDCA3Q99618 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDCA3Q99618 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDCA3Q99618 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDCA3Q99618 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC16.34■□□□□ 0.21
CDCA3Q99618 HSPB1P2-201ENST00000448722 546 ntBASIC16.34■□□□□ 0.21
CDCA3Q99618 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC16.34■□□□□ 0.21
CDCA3Q99618 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDCA3Q99618 RN7SL769P-201ENST00000469386 295 ntBASIC16.34■□□□□ 0.21
CDCA3Q99618 ATP6V0CP2-201ENST00000469409 207 ntBASIC16.34■□□□□ 0.21
CDCA3Q99618 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC16.34■□□□□ 0.21
CDCA3Q99618 AC105129.2-201ENST00000559536 390 ntBASIC16.34■□□□□ 0.21
CDCA3Q99618 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms