Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CASD1Q96PB1 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC16.83■□□□□ 0.28
CASD1Q96PB1 AC108725.1-201ENST00000495472 409 ntBASIC16.83■□□□□ 0.28
CASD1Q96PB1 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.83■□□□□ 0.28
CASD1Q96PB1 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CASD1Q96PB1 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CASD1Q96PB1 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC16.83■□□□□ 0.28
CASD1Q96PB1 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CASD1Q96PB1 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.83■□□□□ 0.28
CASD1Q96PB1 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.83■□□□□ 0.28
CASD1Q96PB1 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
CASD1Q96PB1 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CASD1Q96PB1 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC16.83■□□□□ 0.28
CASD1Q96PB1 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.83■□□□□ 0.28
CASD1Q96PB1 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CASD1Q96PB1 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CASD1Q96PB1 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CASD1Q96PB1 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
CASD1Q96PB1 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CASD1Q96PB1 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CASD1Q96PB1 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CASD1Q96PB1 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CASD1Q96PB1 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.82■□□□□ 0.28
CASD1Q96PB1 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CASD1Q96PB1 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CASD1Q96PB1 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CASD1Q96PB1 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CASD1Q96PB1 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CASD1Q96PB1 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.82■□□□□ 0.28
CASD1Q96PB1 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.82■□□□□ 0.28
CASD1Q96PB1 CNN2P8-201ENST00000421872 913 ntBASIC16.82■□□□□ 0.28
CASD1Q96PB1 YBX1P6-201ENST00000442962 1002 ntBASIC16.82■□□□□ 0.28
CASD1Q96PB1 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC16.82■□□□□ 0.28
CASD1Q96PB1 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC16.82■□□□□ 0.28
CASD1Q96PB1 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.82■□□□□ 0.28
CASD1Q96PB1 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CASD1Q96PB1 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC16.82■□□□□ 0.28
CASD1Q96PB1 AL606495.2-201ENST00000605867 535 ntBASIC16.82■□□□□ 0.28
CASD1Q96PB1 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CASD1Q96PB1 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CASD1Q96PB1 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.82■□□□□ 0.28
CASD1Q96PB1 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CASD1Q96PB1 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CASD1Q96PB1 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.82■□□□□ 0.28
CASD1Q96PB1 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CASD1Q96PB1 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.82■□□□□ 0.28
CASD1Q96PB1 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CASD1Q96PB1 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CASD1Q96PB1 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.81■□□□□ 0.28
CASD1Q96PB1 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.81■□□□□ 0.28
CASD1Q96PB1 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC16.81■□□□□ 0.28
CASD1Q96PB1 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CASD1Q96PB1 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CASD1Q96PB1 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.81■□□□□ 0.28
CASD1Q96PB1 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CASD1Q96PB1 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CASD1Q96PB1 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CASD1Q96PB1 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.81■□□□□ 0.28
CASD1Q96PB1 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CASD1Q96PB1 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CASD1Q96PB1 KRT8P44-201ENST00000441609 1350 ntBASIC16.81■□□□□ 0.28
CASD1Q96PB1 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CASD1Q96PB1 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CASD1Q96PB1 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CASD1Q96PB1 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC16.81■□□□□ 0.28
CASD1Q96PB1 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC16.81■□□□□ 0.28
CASD1Q96PB1 C2orf27AP3-201ENST00000434123 579 ntBASIC16.81■□□□□ 0.28
CASD1Q96PB1 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CASD1Q96PB1 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC16.81■□□□□ 0.28
CASD1Q96PB1 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC16.81■□□□□ 0.28
CASD1Q96PB1 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CASD1Q96PB1 AC010328.2-201ENST00000597698 1111 ntBASIC16.81■□□□□ 0.28
CASD1Q96PB1 AL354718.3-201ENST00000616414 581 ntBASIC16.81■□□□□ 0.28
CASD1Q96PB1 AC009542.2-202ENST00000619004 1067 ntBASIC16.81■□□□□ 0.28
CASD1Q96PB1 CR382287.1-201ENST00000623954 586 ntBASIC16.81■□□□□ 0.28
CASD1Q96PB1 AC008687.7-202ENST00000637404 953 ntBASIC16.81■□□□□ 0.28
CASD1Q96PB1 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CASD1Q96PB1 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.81■□□□□ 0.28
CASD1Q96PB1 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.81■□□□□ 0.28
CASD1Q96PB1 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CASD1Q96PB1 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CASD1Q96PB1 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.8■□□□□ 0.28
CASD1Q96PB1 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CASD1Q96PB1 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CASD1Q96PB1 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CASD1Q96PB1 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CASD1Q96PB1 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.8■□□□□ 0.28
CASD1Q96PB1 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CASD1Q96PB1 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CASD1Q96PB1 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CASD1Q96PB1 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CASD1Q96PB1 TPO-206ENST00000382269 1155 ntTSL 5 BASIC16.8■□□□□ 0.28
CASD1Q96PB1 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CASD1Q96PB1 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CASD1Q96PB1 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC16.8■□□□□ 0.28
CASD1Q96PB1 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CASD1Q96PB1 CD74-212ENST00000524315 584 ntTSL 5 BASIC16.8■□□□□ 0.28
CASD1Q96PB1 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CASD1Q96PB1 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CASD1Q96PB1 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms