Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SNX27Q96L92 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.15■□□□□ 0.34
SNX27Q96L92 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNX27Q96L92 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNX27Q96L92 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNX27Q96L92 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNX27Q96L92 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.15■□□□□ 0.34
SNX27Q96L92 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.15■□□□□ 0.34
SNX27Q96L92 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.15■□□□□ 0.34
SNX27Q96L92 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNX27Q96L92 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SNX27Q96L92 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
SNX27Q96L92 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNX27Q96L92 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.14■□□□□ 0.33
SNX27Q96L92 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNX27Q96L92 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
SNX27Q96L92 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC17.14■□□□□ 0.33
SNX27Q96L92 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SNX27Q96L92 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SNX27Q96L92 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.14■□□□□ 0.33
SNX27Q96L92 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNX27Q96L92 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC17.14■□□□□ 0.33
SNX27Q96L92 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SNX27Q96L92 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
SNX27Q96L92 RARRES2P5-201ENST00000564013 466 ntBASIC17.14■□□□□ 0.33
SNX27Q96L92 RRP7BP-205ENST00000566851 833 ntBASIC17.14■□□□□ 0.33
SNX27Q96L92 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.14■□□□□ 0.33
SNX27Q96L92 AC008494.3-201ENST00000606615 944 ntBASIC17.14■□□□□ 0.33
SNX27Q96L92 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.14■□□□□ 0.33
SNX27Q96L92 PFAS-212ENST00000625942 396 ntTSL 5 BASIC17.14■□□□□ 0.33
SNX27Q96L92 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC17.14■□□□□ 0.33
SNX27Q96L92 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC17.14■□□□□ 0.33
SNX27Q96L92 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNX27Q96L92 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SNX27Q96L92 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
SNX27Q96L92 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SNX27Q96L92 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.14■□□□□ 0.33
SNX27Q96L92 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SNX27Q96L92 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SNX27Q96L92 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SNX27Q96L92 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNX27Q96L92 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SNX27Q96L92 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.13■□□□□ 0.33
SNX27Q96L92 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.13■□□□□ 0.33
SNX27Q96L92 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
SNX27Q96L92 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SNX27Q96L92 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNX27Q96L92 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNX27Q96L92 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNX27Q96L92 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC17.13■□□□□ 0.33
SNX27Q96L92 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC17.13■□□□□ 0.33
SNX27Q96L92 CD74-212ENST00000524315 584 ntTSL 5 BASIC17.13■□□□□ 0.33
SNX27Q96L92 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC17.13■□□□□ 0.33
SNX27Q96L92 MIR4538-201ENST00000581377 78 ntBASIC17.13■□□□□ 0.33
SNX27Q96L92 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC17.13■□□□□ 0.33
SNX27Q96L92 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNX27Q96L92 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.13■□□□□ 0.33
SNX27Q96L92 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNX27Q96L92 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SNX27Q96L92 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNX27Q96L92 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SNX27Q96L92 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
SNX27Q96L92 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNX27Q96L92 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.13■□□□□ 0.33
SNX27Q96L92 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNX27Q96L92 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.12■□□□□ 0.33
SNX27Q96L92 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNX27Q96L92 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.12■□□□□ 0.33
SNX27Q96L92 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNX27Q96L92 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.12■□□□□ 0.33
SNX27Q96L92 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNX27Q96L92 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNX27Q96L92 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNX27Q96L92 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNX27Q96L92 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNX27Q96L92 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNX27Q96L92 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SNX27Q96L92 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.12■□□□□ 0.33
SNX27Q96L92 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNX27Q96L92 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC17.12■□□□□ 0.33
SNX27Q96L92 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
SNX27Q96L92 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.12■□□□□ 0.33
SNX27Q96L92 DGCR5-201ENST00000399539 862 ntBASIC17.12■□□□□ 0.33
SNX27Q96L92 AC079776.1-201ENST00000401540 1152 ntBASIC17.12■□□□□ 0.33
SNX27Q96L92 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC17.12■□□□□ 0.33
SNX27Q96L92 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNX27Q96L92 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC17.12■□□□□ 0.33
SNX27Q96L92 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
SNX27Q96L92 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC17.12■□□□□ 0.33
SNX27Q96L92 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17.12■□□□□ 0.33
SNX27Q96L92 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SNX27Q96L92 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.12■□□□□ 0.33
SNX27Q96L92 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.12■□□□□ 0.33
SNX27Q96L92 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
SNX27Q96L92 RHOQP1-201ENST00000555758 579 ntBASIC17.12■□□□□ 0.33
SNX27Q96L92 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC17.12■□□□□ 0.33
SNX27Q96L92 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC17.12■□□□□ 0.33
SNX27Q96L92 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNX27Q96L92 AC093726.1-201ENST00000608064 963 ntBASIC17.12■□□□□ 0.33
SNX27Q96L92 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms