Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC17.16■□□□□ 0.34
LRCH3Q96II8 AC126915.1-201ENST00000522847 1038 ntBASIC17.16■□□□□ 0.34
LRCH3Q96II8 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.16■□□□□ 0.34
LRCH3Q96II8 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
LRCH3Q96II8 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC17.16■□□□□ 0.34
LRCH3Q96II8 AC025279.2-201ENST00000569730 653 ntBASIC17.16■□□□□ 0.34
LRCH3Q96II8 RN7SL574P-201ENST00000581512 297 ntBASIC17.16■□□□□ 0.34
LRCH3Q96II8 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC17.16■□□□□ 0.34
LRCH3Q96II8 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC17.16■□□□□ 0.34
LRCH3Q96II8 AC011491.1-203ENST00000637688 543 ntBASIC17.16■□□□□ 0.34
LRCH3Q96II8 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRCH3Q96II8 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRCH3Q96II8 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRCH3Q96II8 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
LRCH3Q96II8 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.16■□□□□ 0.34
LRCH3Q96II8 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRCH3Q96II8 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRCH3Q96II8 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRCH3Q96II8 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRCH3Q96II8 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRCH3Q96II8 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRCH3Q96II8 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.16■□□□□ 0.34
LRCH3Q96II8 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRCH3Q96II8 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRCH3Q96II8 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.16■□□□□ 0.34
LRCH3Q96II8 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRCH3Q96II8 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.15■□□□□ 0.34
LRCH3Q96II8 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.15■□□□□ 0.34
LRCH3Q96II8 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRCH3Q96II8 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
LRCH3Q96II8 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.15■□□□□ 0.34
LRCH3Q96II8 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
LRCH3Q96II8 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRCH3Q96II8 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRCH3Q96II8 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
LRCH3Q96II8 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.15■□□□□ 0.34
LRCH3Q96II8 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LRCH3Q96II8 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRCH3Q96II8 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LRCH3Q96II8 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRCH3Q96II8 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LRCH3Q96II8 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.15■□□□□ 0.34
LRCH3Q96II8 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC17.15■□□□□ 0.34
LRCH3Q96II8 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.15■□□□□ 0.34
LRCH3Q96II8 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.15■□□□□ 0.34
LRCH3Q96II8 MTND4LP12-201ENST00000448237 295 ntBASIC17.15■□□□□ 0.34
LRCH3Q96II8 VDAC1P7-201ENST00000462417 847 ntBASIC17.15■□□□□ 0.34
LRCH3Q96II8 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC17.15■□□□□ 0.34
LRCH3Q96II8 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC17.15■□□□□ 0.34
LRCH3Q96II8 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LRCH3Q96II8 CYGB-203ENST00000589145 788 ntTSL 3 BASIC17.15■□□□□ 0.34
LRCH3Q96II8 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
LRCH3Q96II8 AC009084.3-201ENST00000623356 437 ntBASIC17.15■□□□□ 0.34
LRCH3Q96II8 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
LRCH3Q96II8 AC133963.1-201ENST00000504166 1679 ntBASIC17.15■□□□□ 0.34
LRCH3Q96II8 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
LRCH3Q96II8 LINC00304-203ENST00000565008 1864 ntBASIC17.15■□□□□ 0.34
LRCH3Q96II8 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LRCH3Q96II8 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
LRCH3Q96II8 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRCH3Q96II8 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRCH3Q96II8 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
LRCH3Q96II8 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRCH3Q96II8 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRCH3Q96II8 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LRCH3Q96II8 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRCH3Q96II8 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.15■□□□□ 0.34
LRCH3Q96II8 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
LRCH3Q96II8 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
LRCH3Q96II8 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.34
LRCH3Q96II8 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.14■□□□□ 0.34
LRCH3Q96II8 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRCH3Q96II8 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRCH3Q96II8 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.14■□□□□ 0.33
LRCH3Q96II8 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
LRCH3Q96II8 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRCH3Q96II8 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
LRCH3Q96II8 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LRCH3Q96II8 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRCH3Q96II8 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC17.14■□□□□ 0.33
LRCH3Q96II8 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC17.14■□□□□ 0.33
LRCH3Q96II8 UBALD1-205ENST00000590891 2641 ntBASIC17.14■□□□□ 0.33
LRCH3Q96II8 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC17.14■□□□□ 0.33
LRCH3Q96II8 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRCH3Q96II8 PKIG-203ENST00000372887 769 ntTSL 3 BASIC17.14■□□□□ 0.33
LRCH3Q96II8 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC17.14■□□□□ 0.33
LRCH3Q96II8 Z97180.1-201ENST00000445173 988 ntBASIC17.14■□□□□ 0.33
LRCH3Q96II8 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
LRCH3Q96II8 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC17.14■□□□□ 0.33
LRCH3Q96II8 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.14■□□□□ 0.33
LRCH3Q96II8 AC005357.2-202ENST00000590507 1060 ntBASIC17.14■□□□□ 0.33
LRCH3Q96II8 AC138649.2-201ENST00000615886 705 ntBASIC17.14■□□□□ 0.33
LRCH3Q96II8 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
LRCH3Q96II8 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRCH3Q96II8 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.14■□□□□ 0.33
LRCH3Q96II8 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
LRCH3Q96II8 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LRCH3Q96II8 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRCH3Q96II8 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRCH3Q96II8 AL138688.1-201ENST00000624851 1594 ntBASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms