Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
APH1AQ96BI3 AL513523.2-202ENST00000427283 2040 ntBASIC14.14□□□□□ -0.15
APH1AQ96BI3 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
APH1AQ96BI3 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
APH1AQ96BI3 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
APH1AQ96BI3 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
APH1AQ96BI3 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
APH1AQ96BI3 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
APH1AQ96BI3 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.14□□□□□ -0.15
APH1AQ96BI3 TSSK5P-201ENST00000423978 907 ntBASIC14.14□□□□□ -0.15
APH1AQ96BI3 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.14□□□□□ -0.15
APH1AQ96BI3 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.14□□□□□ -0.15
APH1AQ96BI3 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.14□□□□□ -0.15
APH1AQ96BI3 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.14□□□□□ -0.15
APH1AQ96BI3 AC004890.2-204ENST00000481968 304 ntBASIC14.14□□□□□ -0.15
APH1AQ96BI3 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.14□□□□□ -0.15
APH1AQ96BI3 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.14□□□□□ -0.15
APH1AQ96BI3 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.14□□□□□ -0.15
APH1AQ96BI3 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.14□□□□□ -0.15
APH1AQ96BI3 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
APH1AQ96BI3 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.14□□□□□ -0.15
APH1AQ96BI3 SPCS2P1-201ENST00000561636 679 ntBASIC14.14□□□□□ -0.15
APH1AQ96BI3 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.14□□□□□ -0.15
APH1AQ96BI3 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.14□□□□□ -0.15
APH1AQ96BI3 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
APH1AQ96BI3 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
APH1AQ96BI3 AL096865.1-201ENST00000606796 927 ntBASIC14.14□□□□□ -0.15
APH1AQ96BI3 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.14□□□□□ -0.15
APH1AQ96BI3 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.14□□□□□ -0.15
APH1AQ96BI3 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.14□□□□□ -0.15
APH1AQ96BI3 CICP6-201ENST00000457191 2729 ntBASIC14.14□□□□□ -0.15
APH1AQ96BI3 AC069224.1-201ENST00000566372 1715 ntBASIC14.14□□□□□ -0.15
APH1AQ96BI3 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
APH1AQ96BI3 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
APH1AQ96BI3 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.14□□□□□ -0.15
APH1AQ96BI3 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
APH1AQ96BI3 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
APH1AQ96BI3 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
APH1AQ96BI3 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.14□□□□□ -0.15
APH1AQ96BI3 REXO1L1P-202ENST00000608646 1974 ntBASIC14.14□□□□□ -0.15
APH1AQ96BI3 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.14□□□□□ -0.15
APH1AQ96BI3 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
APH1AQ96BI3 AL162727.3-201ENST00000635661 2787 ntBASIC14.14□□□□□ -0.15
APH1AQ96BI3 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
APH1AQ96BI3 AL596257.1-201ENST00000641463 2694 ntBASIC14.14□□□□□ -0.15
APH1AQ96BI3 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
APH1AQ96BI3 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
APH1AQ96BI3 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.14□□□□□ -0.15
APH1AQ96BI3 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.14□□□□□ -0.15
APH1AQ96BI3 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
APH1AQ96BI3 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
APH1AQ96BI3 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
APH1AQ96BI3 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.13□□□□□ -0.15
APH1AQ96BI3 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
APH1AQ96BI3 AC022144.1-201ENST00000602255 1580 ntBASIC14.13□□□□□ -0.15
APH1AQ96BI3 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.13□□□□□ -0.15
APH1AQ96BI3 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.13□□□□□ -0.15
APH1AQ96BI3 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
APH1AQ96BI3 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.13□□□□□ -0.15
APH1AQ96BI3 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.13□□□□□ -0.15
APH1AQ96BI3 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
APH1AQ96BI3 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
APH1AQ96BI3 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.13□□□□□ -0.15
APH1AQ96BI3 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
APH1AQ96BI3 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
APH1AQ96BI3 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.13□□□□□ -0.15
APH1AQ96BI3 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
APH1AQ96BI3 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
APH1AQ96BI3 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.13□□□□□ -0.15
APH1AQ96BI3 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.13□□□□□ -0.15
APH1AQ96BI3 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.13□□□□□ -0.15
APH1AQ96BI3 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
APH1AQ96BI3 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
APH1AQ96BI3 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
APH1AQ96BI3 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.13□□□□□ -0.15
APH1AQ96BI3 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
APH1AQ96BI3 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.13□□□□□ -0.15
APH1AQ96BI3 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.13□□□□□ -0.15
APH1AQ96BI3 BCRP1-201ENST00000444246 691 ntBASIC14.13□□□□□ -0.15
APH1AQ96BI3 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.13□□□□□ -0.15
APH1AQ96BI3 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.13□□□□□ -0.15
APH1AQ96BI3 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
APH1AQ96BI3 LINC02447-202ENST00000501888 2146 ntBASIC14.13□□□□□ -0.15
APH1AQ96BI3 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.13□□□□□ -0.15
APH1AQ96BI3 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.13□□□□□ -0.15
APH1AQ96BI3 AL512361.1-201ENST00000554200 418 ntBASIC14.13□□□□□ -0.15
APH1AQ96BI3 AC010336.2-201ENST00000564226 506 ntBASIC14.13□□□□□ -0.15
APH1AQ96BI3 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.13□□□□□ -0.15
APH1AQ96BI3 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.13□□□□□ -0.15
APH1AQ96BI3 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.13□□□□□ -0.15
APH1AQ96BI3 AL844908.2-201ENST00000609461 460 ntBASIC14.13□□□□□ -0.15
APH1AQ96BI3 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.13□□□□□ -0.15
APH1AQ96BI3 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.13□□□□□ -0.15
APH1AQ96BI3 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.13□□□□□ -0.15
APH1AQ96BI3 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
APH1AQ96BI3 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
APH1AQ96BI3 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
APH1AQ96BI3 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.13□□□□□ -0.15
APH1AQ96BI3 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
APH1AQ96BI3 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms