Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCGF3Q3KNV8 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCGF3Q3KNV8 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCGF3Q3KNV8 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PCGF3Q3KNV8 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
PCGF3Q3KNV8 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCGF3Q3KNV8 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
PCGF3Q3KNV8 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCGF3Q3KNV8 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.22□□□□□ -0.13
PCGF3Q3KNV8 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
PCGF3Q3KNV8 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCGF3Q3KNV8 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
PCGF3Q3KNV8 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.22□□□□□ -0.13
PCGF3Q3KNV8 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.22□□□□□ -0.13
PCGF3Q3KNV8 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
PCGF3Q3KNV8 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PCGF3Q3KNV8 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCGF3Q3KNV8 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCGF3Q3KNV8 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCGF3Q3KNV8 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
PCGF3Q3KNV8 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCGF3Q3KNV8 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCGF3Q3KNV8 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
PCGF3Q3KNV8 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCGF3Q3KNV8 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.13
PCGF3Q3KNV8 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PCGF3Q3KNV8 AC023157.3-201ENST00000619086 2088 ntBASIC14.21□□□□□ -0.13
PCGF3Q3KNV8 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
PCGF3Q3KNV8 REXO1L8P-201ENST00000604378 1897 ntBASIC14.21□□□□□ -0.13
PCGF3Q3KNV8 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCGF3Q3KNV8 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.13
PCGF3Q3KNV8 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCGF3Q3KNV8 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.21□□□□□ -0.13
PCGF3Q3KNV8 PCDHA3-202ENST00000532566 4594 ntBASIC14.21□□□□□ -0.13
PCGF3Q3KNV8 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PCGF3Q3KNV8 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCGF3Q3KNV8 AC112504.1-201ENST00000623415 1841 ntBASIC14.21□□□□□ -0.13
PCGF3Q3KNV8 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCGF3Q3KNV8 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCGF3Q3KNV8 AL355306.1-201ENST00000415580 579 ntBASIC14.21□□□□□ -0.13
PCGF3Q3KNV8 AL671277.1-201ENST00000429656 993 ntBASIC14.21□□□□□ -0.13
PCGF3Q3KNV8 DNAJB3-202ENST00000449667 1266 ntBASIC14.21□□□□□ -0.13
PCGF3Q3KNV8 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.21□□□□□ -0.13
PCGF3Q3KNV8 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PCGF3Q3KNV8 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.21□□□□□ -0.13
PCGF3Q3KNV8 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.21□□□□□ -0.13
PCGF3Q3KNV8 RARRES2P8-201ENST00000566335 367 ntBASIC14.21□□□□□ -0.13
PCGF3Q3KNV8 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.21□□□□□ -0.13
PCGF3Q3KNV8 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.21□□□□□ -0.13
PCGF3Q3KNV8 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
PCGF3Q3KNV8 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
PCGF3Q3KNV8 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.21□□□□□ -0.13
PCGF3Q3KNV8 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.21□□□□□ -0.13
PCGF3Q3KNV8 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
PCGF3Q3KNV8 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.21□□□□□ -0.13
PCGF3Q3KNV8 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCGF3Q3KNV8 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCGF3Q3KNV8 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCGF3Q3KNV8 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCGF3Q3KNV8 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PCGF3Q3KNV8 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCGF3Q3KNV8 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
PCGF3Q3KNV8 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
PCGF3Q3KNV8 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.21□□□□□ -0.14
PCGF3Q3KNV8 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PCGF3Q3KNV8 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
PCGF3Q3KNV8 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
PCGF3Q3KNV8 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.21□□□□□ -0.14
PCGF3Q3KNV8 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
PCGF3Q3KNV8 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
PCGF3Q3KNV8 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.2□□□□□ -0.14
PCGF3Q3KNV8 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.2□□□□□ -0.14
PCGF3Q3KNV8 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PCGF3Q3KNV8 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.2□□□□□ -0.14
PCGF3Q3KNV8 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.2□□□□□ -0.14
PCGF3Q3KNV8 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.2□□□□□ -0.14
PCGF3Q3KNV8 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PCGF3Q3KNV8 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCGF3Q3KNV8 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PCGF3Q3KNV8 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCGF3Q3KNV8 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PCGF3Q3KNV8 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.2□□□□□ -0.14
PCGF3Q3KNV8 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCGF3Q3KNV8 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.2□□□□□ -0.14
PCGF3Q3KNV8 OR2I1P-210ENST00000642037 4691 ntBASIC14.2□□□□□ -0.14
PCGF3Q3KNV8 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCGF3Q3KNV8 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCGF3Q3KNV8 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
PCGF3Q3KNV8 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PCGF3Q3KNV8 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCGF3Q3KNV8 AC092474.2-201ENST00000424288 719 ntBASIC14.2□□□□□ -0.14
PCGF3Q3KNV8 RPS8P6-201ENST00000426177 609 ntBASIC14.2□□□□□ -0.14
PCGF3Q3KNV8 CNN2P11-201ENST00000429351 262 ntBASIC14.2□□□□□ -0.14
PCGF3Q3KNV8 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.2□□□□□ -0.14
PCGF3Q3KNV8 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.2□□□□□ -0.14
PCGF3Q3KNV8 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.2□□□□□ -0.14
PCGF3Q3KNV8 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.2□□□□□ -0.14
PCGF3Q3KNV8 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.2□□□□□ -0.14
PCGF3Q3KNV8 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.2□□□□□ -0.14
PCGF3Q3KNV8 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms