Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H3AP68431 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.94□□□□□ -0.18
HIST1H3AP68431 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.94□□□□□ -0.18
HIST1H3AP68431 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.94□□□□□ -0.18
HIST1H3AP68431 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H3AP68431 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H3AP68431 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H3AP68431 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.94□□□□□ -0.18
HIST1H3AP68431 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H3AP68431 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
HIST1H3AP68431 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H3AP68431 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.94□□□□□ -0.18
HIST1H3AP68431 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC13.94□□□□□ -0.18
HIST1H3AP68431 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC13.94□□□□□ -0.18
HIST1H3AP68431 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H3AP68431 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.94□□□□□ -0.18
HIST1H3AP68431 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H3AP68431 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.94□□□□□ -0.18
HIST1H3AP68431 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
HIST1H3AP68431 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.94□□□□□ -0.18
HIST1H3AP68431 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.94□□□□□ -0.18
HIST1H3AP68431 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H3AP68431 AL133215.2-201ENST00000609242 977 ntBASIC13.94□□□□□ -0.18
HIST1H3AP68431 TMBIM7P-203ENST00000641617 1718 ntBASIC13.94□□□□□ -0.18
HIST1H3AP68431 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.94□□□□□ -0.18
HIST1H3AP68431 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H3AP68431 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H3AP68431 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.94□□□□□ -0.18
HIST1H3AP68431 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H3AP68431 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H3AP68431 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H3AP68431 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
HIST1H3AP68431 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H3AP68431 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.94□□□□□ -0.18
HIST1H3AP68431 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.93□□□□□ -0.18
HIST1H3AP68431 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H3AP68431 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
HIST1H3AP68431 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
HIST1H3AP68431 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H3AP68431 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
HIST1H3AP68431 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC13.93□□□□□ -0.18
HIST1H3AP68431 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC13.93□□□□□ -0.18
HIST1H3AP68431 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC13.93□□□□□ -0.18
HIST1H3AP68431 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.93□□□□□ -0.18
HIST1H3AP68431 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.93□□□□□ -0.18
HIST1H3AP68431 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
HIST1H3AP68431 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H3AP68431 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H3AP68431 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.93□□□□□ -0.18
HIST1H3AP68431 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.93□□□□□ -0.18
HIST1H3AP68431 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H3AP68431 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H3AP68431 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.93□□□□□ -0.18
HIST1H3AP68431 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H3AP68431 AC136604.1-201ENST00000418535 575 ntBASIC13.93□□□□□ -0.18
HIST1H3AP68431 RPP21-221ENST00000428040 594 ntTSL 2 BASIC13.93□□□□□ -0.18
HIST1H3AP68431 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H3AP68431 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC13.93□□□□□ -0.18
HIST1H3AP68431 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H3AP68431 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.93□□□□□ -0.18
HIST1H3AP68431 AC092865.5-201ENST00000545435 363 ntBASIC13.93□□□□□ -0.18
HIST1H3AP68431 CALM1-205ENST00000553542 877 ntTSL 5 BASIC13.93□□□□□ -0.18
HIST1H3AP68431 HNRNPUP1-201ENST00000554987 333 ntBASIC13.93□□□□□ -0.18
HIST1H3AP68431 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC13.93□□□□□ -0.18
HIST1H3AP68431 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.93□□□□□ -0.18
HIST1H3AP68431 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC13.93□□□□□ -0.18
HIST1H3AP68431 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC13.93□□□□□ -0.18
HIST1H3AP68431 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC13.93□□□□□ -0.18
HIST1H3AP68431 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.93□□□□□ -0.18
HIST1H3AP68431 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.93□□□□□ -0.18
HIST1H3AP68431 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC13.93□□□□□ -0.18
HIST1H3AP68431 RN7SL828P-201ENST00000607615 303 ntBASIC13.93□□□□□ -0.18
HIST1H3AP68431 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC13.93□□□□□ -0.18
HIST1H3AP68431 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H3AP68431 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H3AP68431 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H3AP68431 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
HIST1H3AP68431 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H3AP68431 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC13.93□□□□□ -0.18
HIST1H3AP68431 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H3AP68431 AL035456.1-201ENST00000456064 1369 ntBASIC13.93□□□□□ -0.18
HIST1H3AP68431 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.93□□□□□ -0.18
HIST1H3AP68431 AC092850.2-201ENST00000623821 2697 ntBASIC13.93□□□□□ -0.18
HIST1H3AP68431 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H3AP68431 AC126755.1-201ENST00000525846 6405 ntBASIC13.93□□□□□ -0.18
HIST1H3AP68431 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H3AP68431 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H3AP68431 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H3AP68431 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H3AP68431 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H3AP68431 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
HIST1H3AP68431 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.92□□□□□ -0.18
HIST1H3AP68431 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H3AP68431 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H3AP68431 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H3AP68431 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
HIST1H3AP68431 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.92□□□□□ -0.18
HIST1H3AP68431 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.92□□□□□ -0.18
HIST1H3AP68431 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
HIST1H3AP68431 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms