Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
AP1S2P56377 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.53■□□□□ 0.08
AP1S2P56377 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
AP1S2P56377 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
AP1S2P56377 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.53■□□□□ 0.08
AP1S2P56377 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.53■□□□□ 0.08
AP1S2P56377 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.53■□□□□ 0.08
AP1S2P56377 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.53■□□□□ 0.08
AP1S2P56377 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.53■□□□□ 0.08
AP1S2P56377 AC069262.1-201ENST00000539058 672 ntBASIC15.53■□□□□ 0.08
AP1S2P56377 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.53■□□□□ 0.08
AP1S2P56377 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.53■□□□□ 0.08
AP1S2P56377 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.53■□□□□ 0.08
AP1S2P56377 MIR4453-201ENST00000584019 89 ntBASIC15.53■□□□□ 0.08
AP1S2P56377 AL133215.2-201ENST00000609242 977 ntBASIC15.53■□□□□ 0.08
AP1S2P56377 LINC00628-201ENST00000628516 1289 ntBASIC15.53■□□□□ 0.08
AP1S2P56377 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
AP1S2P56377 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
AP1S2P56377 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.53■□□□□ 0.08
AP1S2P56377 AP003680.1-201ENST00000598970 3660 ntBASIC15.53■□□□□ 0.08
AP1S2P56377 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
AP1S2P56377 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
AP1S2P56377 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
AP1S2P56377 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
AP1S2P56377 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.53■□□□□ 0.08
AP1S2P56377 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.53■□□□□ 0.08
AP1S2P56377 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
AP1S2P56377 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
AP1S2P56377 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
AP1S2P56377 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
AP1S2P56377 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
AP1S2P56377 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.53■□□□□ 0.08
AP1S2P56377 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.53■□□□□ 0.08
AP1S2P56377 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
AP1S2P56377 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
AP1S2P56377 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.52■□□□□ 0.08
AP1S2P56377 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
AP1S2P56377 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.52■□□□□ 0.08
AP1S2P56377 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
AP1S2P56377 AC018892.3-201ENST00000623986 2499 ntBASIC15.52■□□□□ 0.08
AP1S2P56377 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
AP1S2P56377 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.52■□□□□ 0.08
AP1S2P56377 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
AP1S2P56377 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
AP1S2P56377 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
AP1S2P56377 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.52■□□□□ 0.08
AP1S2P56377 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
AP1S2P56377 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.52■□□□□ 0.08
AP1S2P56377 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.52■□□□□ 0.08
AP1S2P56377 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.52■□□□□ 0.08
AP1S2P56377 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.52■□□□□ 0.08
AP1S2P56377 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
AP1S2P56377 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.52■□□□□ 0.08
AP1S2P56377 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
AP1S2P56377 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.52■□□□□ 0.08
AP1S2P56377 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.52■□□□□ 0.08
AP1S2P56377 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.52■□□□□ 0.08
AP1S2P56377 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
AP1S2P56377 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.52■□□□□ 0.07
AP1S2P56377 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
AP1S2P56377 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
AP1S2P56377 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
AP1S2P56377 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.52■□□□□ 0.07
AP1S2P56377 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.52■□□□□ 0.07
AP1S2P56377 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.52■□□□□ 0.07
AP1S2P56377 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
AP1S2P56377 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
AP1S2P56377 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
AP1S2P56377 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.52■□□□□ 0.07
AP1S2P56377 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
AP1S2P56377 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
AP1S2P56377 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.52■□□□□ 0.07
AP1S2P56377 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.51■□□□□ 0.07
AP1S2P56377 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP1S2P56377 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
AP1S2P56377 KRT8P12-202ENST00000472924 1397 ntBASIC15.51■□□□□ 0.07
AP1S2P56377 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.51■□□□□ 0.07
AP1S2P56377 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.51■□□□□ 0.07
AP1S2P56377 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.51■□□□□ 0.07
AP1S2P56377 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
AP1S2P56377 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.51■□□□□ 0.07
AP1S2P56377 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
AP1S2P56377 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
AP1S2P56377 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.51■□□□□ 0.07
AP1S2P56377 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
AP1S2P56377 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.51■□□□□ 0.07
AP1S2P56377 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP1S2P56377 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP1S2P56377 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP1S2P56377 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.51■□□□□ 0.07
AP1S2P56377 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
AP1S2P56377 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.51■□□□□ 0.07
AP1S2P56377 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP1S2P56377 TSEN15P1-201ENST00000423257 515 ntBASIC15.51■□□□□ 0.07
AP1S2P56377 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.51■□□□□ 0.07
AP1S2P56377 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.51■□□□□ 0.07
AP1S2P56377 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.51■□□□□ 0.07
AP1S2P56377 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.51■□□□□ 0.07
AP1S2P56377 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
AP1S2P56377 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms