Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.75■□□□□ 0.11
CDKN2DP55273 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CDKN2DP55273 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.75■□□□□ 0.11
CDKN2DP55273 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDKN2DP55273 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CDKN2DP55273 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
CDKN2DP55273 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDKN2DP55273 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.75■□□□□ 0.11
CDKN2DP55273 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.75■□□□□ 0.11
CDKN2DP55273 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CDKN2DP55273 PHKG1P2-201ENST00000457537 863 ntBASIC15.75■□□□□ 0.11
CDKN2DP55273 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.75■□□□□ 0.11
CDKN2DP55273 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.75■□□□□ 0.11
CDKN2DP55273 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.75■□□□□ 0.11
CDKN2DP55273 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.75■□□□□ 0.11
CDKN2DP55273 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
CDKN2DP55273 MIR3687-2-201ENST00000577708 61 ntBASIC15.75■□□□□ 0.11
CDKN2DP55273 MIR3687-1-201ENST00000614492 61 ntBASIC15.75■□□□□ 0.11
CDKN2DP55273 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CDKN2DP55273 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDKN2DP55273 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.75■□□□□ 0.11
CDKN2DP55273 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CDKN2DP55273 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDKN2DP55273 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CDKN2DP55273 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.75■□□□□ 0.11
CDKN2DP55273 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDKN2DP55273 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDKN2DP55273 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CDKN2DP55273 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDKN2DP55273 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.75■□□□□ 0.11
CDKN2DP55273 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.75■□□□□ 0.11
CDKN2DP55273 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.75■□□□□ 0.11
CDKN2DP55273 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDKN2DP55273 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDKN2DP55273 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.74■□□□□ 0.11
CDKN2DP55273 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDKN2DP55273 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDKN2DP55273 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.74■□□□□ 0.11
CDKN2DP55273 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.74■□□□□ 0.11
CDKN2DP55273 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDKN2DP55273 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDKN2DP55273 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.74■□□□□ 0.11
CDKN2DP55273 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDKN2DP55273 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.74■□□□□ 0.11
CDKN2DP55273 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.74■□□□□ 0.11
CDKN2DP55273 AC138035.3-201ENST00000622706 2791 ntBASIC15.74■□□□□ 0.11
CDKN2DP55273 AC127383.1-201ENST00000444697 1800 ntBASIC15.74■□□□□ 0.11
CDKN2DP55273 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CDKN2DP55273 UPF3AP3-201ENST00000420996 769 ntBASIC15.74■□□□□ 0.11
CDKN2DP55273 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.74■□□□□ 0.11
CDKN2DP55273 RBPMS2P1-201ENST00000437762 623 ntBASIC15.74■□□□□ 0.11
CDKN2DP55273 SPDYE14P-201ENST00000442619 822 ntBASIC15.74■□□□□ 0.11
CDKN2DP55273 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.74■□□□□ 0.11
CDKN2DP55273 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.74■□□□□ 0.11
CDKN2DP55273 AP000344.2-201ENST00000512987 629 ntBASIC15.74■□□□□ 0.11
CDKN2DP55273 AC105021.1-202ENST00000570572 669 ntBASIC15.74■□□□□ 0.11
CDKN2DP55273 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.74■□□□□ 0.11
CDKN2DP55273 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.74■□□□□ 0.11
CDKN2DP55273 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.74■□□□□ 0.11
CDKN2DP55273 AC018529.1-201ENST00000613063 361 ntBASIC15.74■□□□□ 0.11
CDKN2DP55273 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.74■□□□□ 0.11
CDKN2DP55273 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDKN2DP55273 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDKN2DP55273 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDKN2DP55273 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDKN2DP55273 AL109954.1-202ENST00000564051 2148 ntBASIC15.74■□□□□ 0.11
CDKN2DP55273 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDKN2DP55273 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.74■□□□□ 0.11
CDKN2DP55273 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDKN2DP55273 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.74■□□□□ 0.11
CDKN2DP55273 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDKN2DP55273 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDKN2DP55273 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.74■□□□□ 0.11
CDKN2DP55273 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
CDKN2DP55273 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDKN2DP55273 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDKN2DP55273 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDKN2DP55273 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.73■□□□□ 0.11
CDKN2DP55273 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDKN2DP55273 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDKN2DP55273 AC006486.2-201ENST00000624246 2199 ntBASIC15.73■□□□□ 0.11
CDKN2DP55273 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CDKN2DP55273 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDKN2DP55273 AC112693.3-201ENST00000624819 1983 ntBASIC15.73■□□□□ 0.11
CDKN2DP55273 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CDKN2DP55273 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.73■□□□□ 0.11
CDKN2DP55273 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDKN2DP55273 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDKN2DP55273 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDKN2DP55273 AZGP1P1-201ENST00000411909 902 ntBASIC15.73■□□□□ 0.11
CDKN2DP55273 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.73■□□□□ 0.11
CDKN2DP55273 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.73■□□□□ 0.11
CDKN2DP55273 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDKN2DP55273 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CDKN2DP55273 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.73■□□□□ 0.11
CDKN2DP55273 HNRNPUP1-201ENST00000554987 333 ntBASIC15.73■□□□□ 0.11
CDKN2DP55273 AC026150.2-201ENST00000564693 1156 ntBASIC15.73■□□□□ 0.11
CDKN2DP55273 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.73■□□□□ 0.11
CDKN2DP55273 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.73■□□□□ 0.11
CDKN2DP55273 AC097359.3-201ENST00000603982 1210 ntBASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms