Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
KRT20P35900 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.26■□□□□ 0.03
KRT20P35900 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.26■□□□□ 0.03
KRT20P35900 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT20P35900 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.26■□□□□ 0.03
KRT20P35900 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
KRT20P35900 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.26■□□□□ 0.03
KRT20P35900 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT20P35900 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
KRT20P35900 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.26■□□□□ 0.03
KRT20P35900 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.26■□□□□ 0.03
KRT20P35900 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
KRT20P35900 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT20P35900 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT20P35900 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KRT20P35900 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT20P35900 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.25■□□□□ 0.03
KRT20P35900 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.25■□□□□ 0.03
KRT20P35900 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT20P35900 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KRT20P35900 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
KRT20P35900 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KRT20P35900 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT20P35900 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.25■□□□□ 0.03
KRT20P35900 AKAP8P1-201ENST00000434743 1349 ntBASIC15.25■□□□□ 0.03
KRT20P35900 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT20P35900 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.25■□□□□ 0.03
KRT20P35900 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.25■□□□□ 0.03
KRT20P35900 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KRT20P35900 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT20P35900 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.25■□□□□ 0.03
KRT20P35900 KRT18P13-201ENST00000400056 1290 ntBASIC15.25■□□□□ 0.03
KRT20P35900 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.25■□□□□ 0.03
KRT20P35900 AL355306.1-201ENST00000415580 579 ntBASIC15.25■□□□□ 0.03
KRT20P35900 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.25■□□□□ 0.03
KRT20P35900 SPDYE11-202ENST00000450699 704 ntBASIC15.25■□□□□ 0.03
KRT20P35900 CEND1P1-201ENST00000451006 455 ntBASIC15.25■□□□□ 0.03
KRT20P35900 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.25■□□□□ 0.03
KRT20P35900 POU5F1P6-201ENST00000466990 990 ntBASIC15.25■□□□□ 0.03
KRT20P35900 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.25■□□□□ 0.03
KRT20P35900 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT20P35900 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KRT20P35900 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KRT20P35900 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.25■□□□□ 0.03
KRT20P35900 SPDYE9P-201ENST00000570642 692 ntBASIC15.25■□□□□ 0.03
KRT20P35900 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC15.25■□□□□ 0.03
KRT20P35900 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
KRT20P35900 AC010327.4-202ENST00000591484 748 ntBASIC15.25■□□□□ 0.03
KRT20P35900 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.25■□□□□ 0.03
KRT20P35900 SPDYE10P-202ENST00000612005 668 ntBASIC15.25■□□□□ 0.03
KRT20P35900 SPDYE8P-202ENST00000612377 668 ntBASIC15.25■□□□□ 0.03
KRT20P35900 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
KRT20P35900 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KRT20P35900 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
KRT20P35900 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KRT20P35900 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT20P35900 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT20P35900 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT20P35900 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.25■□□□□ 0.03
KRT20P35900 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
KRT20P35900 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
KRT20P35900 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT20P35900 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KRT20P35900 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
KRT20P35900 PPT1-215ENST00000641471 2368 ntBASIC15.25■□□□□ 0.03
KRT20P35900 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.25■□□□□ 0.03
KRT20P35900 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT20P35900 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.25■□□□□ 0.03
KRT20P35900 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
KRT20P35900 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KRT20P35900 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KRT20P35900 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
KRT20P35900 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
KRT20P35900 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
KRT20P35900 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.24■□□□□ 0.03
KRT20P35900 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
KRT20P35900 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
KRT20P35900 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
KRT20P35900 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
KRT20P35900 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KRT20P35900 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KRT20P35900 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KRT20P35900 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KRT20P35900 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KRT20P35900 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KRT20P35900 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.24■□□□□ 0.03
KRT20P35900 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.24■□□□□ 0.03
KRT20P35900 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.24■□□□□ 0.03
KRT20P35900 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
KRT20P35900 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
KRT20P35900 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.24■□□□□ 0.03
KRT20P35900 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.24■□□□□ 0.03
KRT20P35900 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
KRT20P35900 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.24■□□□□ 0.03
KRT20P35900 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.24■□□□□ 0.03
KRT20P35900 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.24■□□□□ 0.03
KRT20P35900 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
KRT20P35900 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.24■□□□□ 0.03
KRT20P35900 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
KRT20P35900 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms