Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC6A4P31645 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SLC6A4P31645 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC6A4P31645 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC6A4P31645 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
SLC6A4P31645 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC6A4P31645 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC6A4P31645 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC6A4P31645 AL391825.1-201ENST00000457671 1364 ntBASIC16.3■□□□□ 0.2
SLC6A4P31645 PCDHA1-201ENST00000378133 2726 ntBASIC16.3■□□□□ 0.2
SLC6A4P31645 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SLC6A4P31645 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.3■□□□□ 0.2
SLC6A4P31645 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.3■□□□□ 0.2
SLC6A4P31645 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC6A4P31645 SLED1-202ENST00000512051 380 ntBASIC16.3■□□□□ 0.2
SLC6A4P31645 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SLC6A4P31645 AC055876.2-201ENST00000531834 546 ntBASIC16.3■□□□□ 0.2
SLC6A4P31645 AC008494.3-201ENST00000606615 944 ntBASIC16.3■□□□□ 0.2
SLC6A4P31645 AL158212.4-201ENST00000624062 1286 ntBASIC16.3■□□□□ 0.2
SLC6A4P31645 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC6A4P31645 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SLC6A4P31645 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC6A4P31645 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC6A4P31645 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC6A4P31645 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.3■□□□□ 0.2
SLC6A4P31645 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC6A4P31645 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SLC6A4P31645 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.3■□□□□ 0.2
SLC6A4P31645 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.3■□□□□ 0.2
SLC6A4P31645 AP003680.1-201ENST00000598970 3660 ntBASIC16.3■□□□□ 0.2
SLC6A4P31645 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.3■□□□□ 0.2
SLC6A4P31645 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC6A4P31645 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC6A4P31645 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC6A4P31645 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SLC6A4P31645 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC6A4P31645 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
SLC6A4P31645 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC6A4P31645 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.29■□□□□ 0.2
SLC6A4P31645 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC6A4P31645 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC6A4P31645 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC6A4P31645 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC6A4P31645 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC6A4P31645 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC6A4P31645 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC6A4P31645 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.29■□□□□ 0.2
SLC6A4P31645 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC6A4P31645 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC6A4P31645 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC6A4P31645 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.29■□□□□ 0.2
SLC6A4P31645 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.29■□□□□ 0.2
SLC6A4P31645 AC098850.1-201ENST00000419919 790 ntBASIC16.29■□□□□ 0.2
SLC6A4P31645 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.29■□□□□ 0.2
SLC6A4P31645 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC6A4P31645 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC6A4P31645 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.29■□□□□ 0.2
SLC6A4P31645 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.29■□□□□ 0.2
SLC6A4P31645 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.29■□□□□ 0.2
SLC6A4P31645 AC007431.3-201ENST00000623221 587 ntBASIC16.29■□□□□ 0.2
SLC6A4P31645 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SLC6A4P31645 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC6A4P31645 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC6A4P31645 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC6A4P31645 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.29■□□□□ 0.2
SLC6A4P31645 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.29■□□□□ 0.2
SLC6A4P31645 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SLC6A4P31645 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC6A4P31645 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC6A4P31645 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SLC6A4P31645 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SLC6A4P31645 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.28■□□□□ 0.2
SLC6A4P31645 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC6A4P31645 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC6A4P31645 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC6A4P31645 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC6A4P31645 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC6A4P31645 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC6A4P31645 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC6A4P31645 DGCR5-201ENST00000399539 862 ntBASIC16.28■□□□□ 0.2
SLC6A4P31645 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.28■□□□□ 0.2
SLC6A4P31645 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC6A4P31645 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC6A4P31645 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC6A4P31645 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC6A4P31645 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC6A4P31645 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.28■□□□□ 0.2
SLC6A4P31645 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC6A4P31645 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC6A4P31645 AL596325.1-201ENST00000563991 1082 ntBASIC16.28■□□□□ 0.2
SLC6A4P31645 RARRES2P5-201ENST00000564013 466 ntBASIC16.28■□□□□ 0.2
SLC6A4P31645 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.28■□□□□ 0.2
SLC6A4P31645 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.28■□□□□ 0.2
SLC6A4P31645 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC6A4P31645 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.28■□□□□ 0.2
SLC6A4P31645 AC099568.2-201ENST00000609194 695 ntBASIC16.28■□□□□ 0.2
SLC6A4P31645 MIR8072-201ENST00000614241 80 ntBASIC16.28■□□□□ 0.2
SLC6A4P31645 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC6A4P31645 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC6A4P31645 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms