Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC18.11■□□□□ 0.49
CNGA1P29973 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CNGA1P29973 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CNGA1P29973 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC18.11■□□□□ 0.49
CNGA1P29973 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC18.11■□□□□ 0.49
CNGA1P29973 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC18.11■□□□□ 0.49
CNGA1P29973 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.11■□□□□ 0.49
CNGA1P29973 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC18.11■□□□□ 0.49
CNGA1P29973 LINC01115-203ENST00000606068 577 ntBASIC18.11■□□□□ 0.49
CNGA1P29973 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC18.11■□□□□ 0.49
CNGA1P29973 RPSAP52-203ENST00000622976 1023 ntBASIC18.11■□□□□ 0.49
CNGA1P29973 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNGA1P29973 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC18.11■□□□□ 0.49
CNGA1P29973 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNGA1P29973 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CNGA1P29973 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CNGA1P29973 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNGA1P29973 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.11■□□□□ 0.49
CNGA1P29973 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CNGA1P29973 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.11■□□□□ 0.49
CNGA1P29973 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNGA1P29973 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CNGA1P29973 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CNGA1P29973 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNGA1P29973 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CNGA1P29973 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNGA1P29973 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CNGA1P29973 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNGA1P29973 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNGA1P29973 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CNGA1P29973 AC005052.1-201ENST00000625181 2492 ntBASIC18.1■□□□□ 0.49
CNGA1P29973 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CNGA1P29973 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNGA1P29973 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNGA1P29973 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CNGA1P29973 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.1■□□□□ 0.49
CNGA1P29973 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNGA1P29973 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.1■□□□□ 0.49
CNGA1P29973 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.1■□□□□ 0.49
CNGA1P29973 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNGA1P29973 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.1■□□□□ 0.49
CNGA1P29973 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNGA1P29973 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC18.1■□□□□ 0.49
CNGA1P29973 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.1■□□□□ 0.49
CNGA1P29973 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CNGA1P29973 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CNGA1P29973 BCYRN1-201ENST00000418539 200 ntBASIC18.1■□□□□ 0.49
CNGA1P29973 BCRP2-202ENST00000447763 634 ntBASIC18.1■□□□□ 0.49
CNGA1P29973 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC18.1■□□□□ 0.49
CNGA1P29973 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CNGA1P29973 BCRP6-201ENST00000510112 632 ntBASIC18.1■□□□□ 0.49
CNGA1P29973 BCRP7-201ENST00000511549 544 ntBASIC18.1■□□□□ 0.49
CNGA1P29973 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC18.1■□□□□ 0.49
CNGA1P29973 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC18.1■□□□□ 0.49
CNGA1P29973 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC18.1■□□□□ 0.49
CNGA1P29973 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CNGA1P29973 SPIB-207ENST00000597855 564 ntTSL 4 BASIC18.1■□□□□ 0.49
CNGA1P29973 TECR-220ENST00000600083 1204 ntTSL 2 BASIC18.1■□□□□ 0.49
CNGA1P29973 AL022328.1-201ENST00000610050 478 ntBASIC18.1■□□□□ 0.49
CNGA1P29973 MIR6869-201ENST00000619434 62 ntBASIC18.1■□□□□ 0.49
CNGA1P29973 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNGA1P29973 AC079328.2-201ENST00000561241 3354 ntBASIC18.1■□□□□ 0.49
CNGA1P29973 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNGA1P29973 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CNGA1P29973 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNGA1P29973 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNGA1P29973 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNGA1P29973 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
CNGA1P29973 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
CNGA1P29973 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.1■□□□□ 0.49
CNGA1P29973 ME2P1-201ENST00000426028 1970 ntBASIC18.1■□□□□ 0.49
CNGA1P29973 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CNGA1P29973 U82695.1-201ENST00000635752 1889 ntBASIC18.09■□□□□ 0.49
CNGA1P29973 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CNGA1P29973 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CNGA1P29973 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.09■□□□□ 0.49
CNGA1P29973 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CNGA1P29973 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CNGA1P29973 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC18.09■□□□□ 0.49
CNGA1P29973 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CNGA1P29973 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CNGA1P29973 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CNGA1P29973 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CNGA1P29973 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CNGA1P29973 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CNGA1P29973 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CNGA1P29973 APOC3-202ENST00000375345 604 ntTSL 5 BASIC18.09■□□□□ 0.49
CNGA1P29973 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC18.09■□□□□ 0.49
CNGA1P29973 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
CNGA1P29973 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC18.09■□□□□ 0.49
CNGA1P29973 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC18.09■□□□□ 0.49
CNGA1P29973 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC18.09■□□□□ 0.49
CNGA1P29973 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC18.09■□□□□ 0.49
CNGA1P29973 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CNGA1P29973 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC18.09■□□□□ 0.49
CNGA1P29973 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CNGA1P29973 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CNGA1P29973 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC18.09■□□□□ 0.49
CNGA1P29973 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CNGA1P29973 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms