Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CD58P19256 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CD58P19256 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CD58P19256 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.14■□□□□ 0.33
CD58P19256 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CD58P19256 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CD58P19256 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.14■□□□□ 0.33
CD58P19256 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.14■□□□□ 0.33
CD58P19256 AL079307.3-201ENST00000556114 283 ntBASIC17.14■□□□□ 0.33
CD58P19256 AC140878.1-201ENST00000565277 250 ntBASIC17.14■□□□□ 0.33
CD58P19256 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.14■□□□□ 0.33
CD58P19256 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CD58P19256 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.14■□□□□ 0.33
CD58P19256 REXO1L1P-202ENST00000608646 1974 ntBASIC17.14■□□□□ 0.33
CD58P19256 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.14■□□□□ 0.33
CD58P19256 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.14■□□□□ 0.33
CD58P19256 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CD58P19256 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.14■□□□□ 0.33
CD58P19256 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.14■□□□□ 0.33
CD58P19256 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CD58P19256 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CD58P19256 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
CD58P19256 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.14■□□□□ 0.33
CD58P19256 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.14■□□□□ 0.33
CD58P19256 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.14■□□□□ 0.33
CD58P19256 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD58P19256 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD58P19256 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD58P19256 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.13■□□□□ 0.33
CD58P19256 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.13■□□□□ 0.33
CD58P19256 KRT8P37-201ENST00000451609 1420 ntBASIC17.13■□□□□ 0.33
CD58P19256 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.13■□□□□ 0.33
CD58P19256 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CD58P19256 CASK-202ENST00000378158 3848 ntTSL 5 BASIC17.13■□□□□ 0.33
CD58P19256 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CD58P19256 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CD58P19256 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD58P19256 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CD58P19256 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.13■□□□□ 0.33
CD58P19256 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.13■□□□□ 0.33
CD58P19256 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD58P19256 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD58P19256 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD58P19256 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CD58P19256 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
CD58P19256 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CD58P19256 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CD58P19256 RPL37AP1-201ENST00000412502 279 ntBASIC17.13■□□□□ 0.33
CD58P19256 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CD58P19256 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
CD58P19256 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.13■□□□□ 0.33
CD58P19256 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD58P19256 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.13■□□□□ 0.33
CD58P19256 IGHV3-42-201ENST00000520410 361 ntBASIC17.13■□□□□ 0.33
CD58P19256 RFPL4AP1-201ENST00000530883 850 ntBASIC17.13■□□□□ 0.33
CD58P19256 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD58P19256 AL138828.2-201ENST00000615812 383 ntBASIC17.13■□□□□ 0.33
CD58P19256 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.13■□□□□ 0.33
CD58P19256 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD58P19256 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.13■□□□□ 0.33
CD58P19256 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD58P19256 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD58P19256 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD58P19256 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD58P19256 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.13■□□□□ 0.33
CD58P19256 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.13■□□□□ 0.33
CD58P19256 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CD58P19256 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD58P19256 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CD58P19256 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CD58P19256 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.12■□□□□ 0.33
CD58P19256 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
CD58P19256 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD58P19256 FLJ16779-201ENST00000612722 7638 ntBASIC17.12■□□□□ 0.33
CD58P19256 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD58P19256 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD58P19256 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CD58P19256 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD58P19256 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD58P19256 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CD58P19256 AC011477.6-201ENST00000604980 1927 ntBASIC17.12■□□□□ 0.33
CD58P19256 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.12■□□□□ 0.33
CD58P19256 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.12■□□□□ 0.33
CD58P19256 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CD58P19256 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CD58P19256 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD58P19256 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.12■□□□□ 0.33
CD58P19256 AC027369.6-201ENST00000525520 931 ntBASIC17.12■□□□□ 0.33
CD58P19256 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CD58P19256 AC073592.8-201ENST00000624126 511 ntBASIC17.12■□□□□ 0.33
CD58P19256 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CD58P19256 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
CD58P19256 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD58P19256 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.12■□□□□ 0.33
CD58P19256 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.12■□□□□ 0.33
CD58P19256 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.12■□□□□ 0.33
CD58P19256 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CD58P19256 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CD58P19256 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.12■□□□□ 0.33
CD58P19256 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms