Protein–RNA interactions for Protein: P01040

CSTA, Cystatin-A, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTAP01040 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
CSTAP01040 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSTAP01040 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSTAP01040 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSTAP01040 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSTAP01040 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.7□□□□□ -0.06
CSTAP01040 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSTAP01040 CYP4F24P-201ENST00000586049 1580 ntBASIC14.7□□□□□ -0.06
CSTAP01040 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSTAP01040 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
CSTAP01040 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSTAP01040 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CSTAP01040 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSTAP01040 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CSTAP01040 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.7□□□□□ -0.06
CSTAP01040 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.7□□□□□ -0.06
CSTAP01040 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.7□□□□□ -0.06
CSTAP01040 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.7□□□□□ -0.06
CSTAP01040 AC003101.2-201ENST00000612557 442 ntBASIC14.7□□□□□ -0.06
CSTAP01040 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.7□□□□□ -0.06
CSTAP01040 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.7□□□□□ -0.06
CSTAP01040 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSTAP01040 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CSTAP01040 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSTAP01040 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSTAP01040 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSTAP01040 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSTAP01040 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.7□□□□□ -0.06
CSTAP01040 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CSTAP01040 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.7□□□□□ -0.06
CSTAP01040 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSTAP01040 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CSTAP01040 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSTAP01040 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CSTAP01040 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CSTAP01040 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CSTAP01040 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.69□□□□□ -0.06
CSTAP01040 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
CSTAP01040 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CSTAP01040 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.69□□□□□ -0.06
CSTAP01040 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSTAP01040 AL162727.3-201ENST00000635661 2787 ntBASIC14.69□□□□□ -0.06
CSTAP01040 REXO1L1P-202ENST00000608646 1974 ntBASIC14.69□□□□□ -0.06
CSTAP01040 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.69□□□□□ -0.06
CSTAP01040 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CSTAP01040 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.69□□□□□ -0.06
CSTAP01040 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSTAP01040 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSTAP01040 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CSTAP01040 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSTAP01040 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSTAP01040 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.69□□□□□ -0.06
CSTAP01040 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSTAP01040 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSTAP01040 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSTAP01040 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.69□□□□□ -0.06
CSTAP01040 MIR1233-2-201ENST00000408138 82 ntBASIC14.69□□□□□ -0.06
CSTAP01040 MIR1233-1-201ENST00000408722 82 ntBASIC14.69□□□□□ -0.06
CSTAP01040 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.69□□□□□ -0.06
CSTAP01040 GPS2P2-201ENST00000430745 888 ntBASIC14.69□□□□□ -0.06
CSTAP01040 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.69□□□□□ -0.06
CSTAP01040 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.69□□□□□ -0.06
CSTAP01040 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.69□□□□□ -0.06
CSTAP01040 AC026150.2-201ENST00000564693 1156 ntBASIC14.69□□□□□ -0.06
CSTAP01040 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSTAP01040 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.69□□□□□ -0.06
CSTAP01040 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.69□□□□□ -0.06
CSTAP01040 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.69□□□□□ -0.06
CSTAP01040 AL596442.2-201ENST00000610240 980 ntBASIC14.69□□□□□ -0.06
CSTAP01040 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSTAP01040 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CSTAP01040 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSTAP01040 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSTAP01040 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSTAP01040 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSTAP01040 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSTAP01040 HYMAI-201ENST00000635591 3347 ntBASIC14.69□□□□□ -0.06
CSTAP01040 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSTAP01040 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CSTAP01040 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CSTAP01040 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSTAP01040 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
CSTAP01040 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSTAP01040 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CSTAP01040 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CSTAP01040 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSTAP01040 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.68□□□□□ -0.06
CSTAP01040 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CSTAP01040 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CSTAP01040 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSTAP01040 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CSTAP01040 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSTAP01040 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CSTAP01040 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CSTAP01040 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSTAP01040 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSTAP01040 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CSTAP01040 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSTAP01040 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.68□□□□□ -0.06
CSTAP01040 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms