Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GFRA3O60609 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.27■□□□□ 0.03
GFRA3O60609 AL121723.1-201ENST00000445194 1519 ntBASIC15.27■□□□□ 0.03
GFRA3O60609 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
GFRA3O60609 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GFRA3O60609 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GFRA3O60609 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GFRA3O60609 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GFRA3O60609 GPAA1P2-202ENST00000606848 1787 ntBASIC15.26■□□□□ 0.03
GFRA3O60609 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GFRA3O60609 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GFRA3O60609 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GFRA3O60609 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.26■□□□□ 0.03
GFRA3O60609 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
GFRA3O60609 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GFRA3O60609 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GFRA3O60609 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.26■□□□□ 0.03
GFRA3O60609 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC15.26■□□□□ 0.03
GFRA3O60609 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
GFRA3O60609 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GFRA3O60609 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GFRA3O60609 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
GFRA3O60609 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
GFRA3O60609 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.26■□□□□ 0.03
GFRA3O60609 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GFRA3O60609 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC15.26■□□□□ 0.03
GFRA3O60609 ISCA2P1-201ENST00000425548 448 ntBASIC15.26■□□□□ 0.03
GFRA3O60609 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC15.26■□□□□ 0.03
GFRA3O60609 FAM8A4P-201ENST00000435433 1213 ntBASIC15.26■□□□□ 0.03
GFRA3O60609 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GFRA3O60609 RNMTL1P1-201ENST00000454103 560 ntBASIC15.26■□□□□ 0.03
GFRA3O60609 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.26■□□□□ 0.03
GFRA3O60609 CSH2-206ENST00000560142 749 ntTSL 5 BASIC15.26■□□□□ 0.03
GFRA3O60609 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC15.26■□□□□ 0.03
GFRA3O60609 AL118516.1-201ENST00000564152 670 ntBASIC15.26■□□□□ 0.03
GFRA3O60609 SAMD11P1-201ENST00000571429 661 ntBASIC15.26■□□□□ 0.03
GFRA3O60609 FTLP5-201ENST00000586853 534 ntBASIC15.26■□□□□ 0.03
GFRA3O60609 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.26■□□□□ 0.03
GFRA3O60609 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC15.26■□□□□ 0.03
GFRA3O60609 IRF3-215ENST00000596822 823 ntTSL 3 BASIC15.26■□□□□ 0.03
GFRA3O60609 AP001002.3-201ENST00000623482 206 ntBASIC15.26■□□□□ 0.03
GFRA3O60609 MME-218ENST00000625667 363 ntTSL 5 BASIC15.26■□□□□ 0.03
GFRA3O60609 AC004923.1-202ENST00000642106 209 ntBASIC15.26■□□□□ 0.03
GFRA3O60609 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GFRA3O60609 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GFRA3O60609 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GFRA3O60609 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GFRA3O60609 AC020916.1-201ENST00000587762 1774 ntBASIC15.26■□□□□ 0.03
GFRA3O60609 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC15.26■□□□□ 0.03
GFRA3O60609 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GFRA3O60609 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.26■□□□□ 0.03
GFRA3O60609 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
GFRA3O60609 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GFRA3O60609 BICD1-207ENST00000551848 1962 ntBASIC15.25■□□□□ 0.03
GFRA3O60609 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
GFRA3O60609 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
GFRA3O60609 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.25■□□□□ 0.03
GFRA3O60609 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
GFRA3O60609 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
GFRA3O60609 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
GFRA3O60609 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GFRA3O60609 AL355312.1-201ENST00000407115 2176 ntBASIC15.25■□□□□ 0.03
GFRA3O60609 LETM1P2-201ENST00000597330 2178 ntBASIC15.25■□□□□ 0.03
GFRA3O60609 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
GFRA3O60609 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GFRA3O60609 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
GFRA3O60609 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GFRA3O60609 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
GFRA3O60609 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GFRA3O60609 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
GFRA3O60609 NPPA-201ENST00000376476 728 ntTSL 3 BASIC15.25■□□□□ 0.03
GFRA3O60609 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.25■□□□□ 0.03
GFRA3O60609 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.25■□□□□ 0.03
GFRA3O60609 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC15.25■□□□□ 0.03
GFRA3O60609 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.25■□□□□ 0.03
GFRA3O60609 AC018463.1-201ENST00000456674 917 ntBASIC15.25■□□□□ 0.03
GFRA3O60609 MARK2P5-201ENST00000507649 634 ntBASIC15.25■□□□□ 0.03
GFRA3O60609 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GFRA3O60609 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.25■□□□□ 0.03
GFRA3O60609 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC15.25■□□□□ 0.03
GFRA3O60609 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC15.25■□□□□ 0.03
GFRA3O60609 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GFRA3O60609 AC243562.2-201ENST00000561247 970 ntBASIC15.25■□□□□ 0.03
GFRA3O60609 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
GFRA3O60609 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC15.25■□□□□ 0.03
GFRA3O60609 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC15.25■□□□□ 0.03
GFRA3O60609 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC15.25■□□□□ 0.03
GFRA3O60609 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.25■□□□□ 0.03
GFRA3O60609 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
GFRA3O60609 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GFRA3O60609 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC15.25■□□□□ 0.03
GFRA3O60609 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
GFRA3O60609 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.25■□□□□ 0.03
GFRA3O60609 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GFRA3O60609 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
GFRA3O60609 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC15.25■□□□□ 0.03
GFRA3O60609 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
GFRA3O60609 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.25■□□□□ 0.03
GFRA3O60609 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15.25■□□□□ 0.03
GFRA3O60609 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms