Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RNF103-CHMP3A0A140T963 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
RNF103-CHMP3A0A140T963 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.47■□□□□ 0.07
RNF103-CHMP3A0A140T963 UNC93B6-202ENST00000528242 690 ntBASIC15.47■□□□□ 0.07
RNF103-CHMP3A0A140T963 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.47■□□□□ 0.07
RNF103-CHMP3A0A140T963 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.47■□□□□ 0.07
RNF103-CHMP3A0A140T963 AP001005.1-201ENST00000571755 1248 ntBASIC15.47■□□□□ 0.07
RNF103-CHMP3A0A140T963 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.47■□□□□ 0.07
RNF103-CHMP3A0A140T963 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
RNF103-CHMP3A0A140T963 MIR3909-201ENST00000579518 119 ntBASIC15.47■□□□□ 0.07
RNF103-CHMP3A0A140T963 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RNF103-CHMP3A0A140T963 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RNF103-CHMP3A0A140T963 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.47■□□□□ 0.07
RNF103-CHMP3A0A140T963 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.47■□□□□ 0.07
RNF103-CHMP3A0A140T963 AC005622.1-201ENST00000636801 1703 ntBASIC15.47■□□□□ 0.07
RNF103-CHMP3A0A140T963 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.47■□□□□ 0.07
RNF103-CHMP3A0A140T963 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF103-CHMP3A0A140T963 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF103-CHMP3A0A140T963 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
RNF103-CHMP3A0A140T963 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF103-CHMP3A0A140T963 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
RNF103-CHMP3A0A140T963 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.47■□□□□ 0.07
RNF103-CHMP3A0A140T963 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF103-CHMP3A0A140T963 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
RNF103-CHMP3A0A140T963 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.47■□□□□ 0.07
RNF103-CHMP3A0A140T963 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.47■□□□□ 0.07
RNF103-CHMP3A0A140T963 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RNF103-CHMP3A0A140T963 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
RNF103-CHMP3A0A140T963 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF103-CHMP3A0A140T963 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF103-CHMP3A0A140T963 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.46■□□□□ 0.07
RNF103-CHMP3A0A140T963 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.46■□□□□ 0.07
RNF103-CHMP3A0A140T963 AC006486.2-201ENST00000624246 2199 ntBASIC15.46■□□□□ 0.07
RNF103-CHMP3A0A140T963 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.46■□□□□ 0.07
RNF103-CHMP3A0A140T963 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
RNF103-CHMP3A0A140T963 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RNF103-CHMP3A0A140T963 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.46■□□□□ 0.07
RNF103-CHMP3A0A140T963 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.46■□□□□ 0.07
RNF103-CHMP3A0A140T963 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.46■□□□□ 0.07
RNF103-CHMP3A0A140T963 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
RNF103-CHMP3A0A140T963 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF103-CHMP3A0A140T963 AC069224.1-201ENST00000566372 1715 ntBASIC15.46■□□□□ 0.07
RNF103-CHMP3A0A140T963 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF103-CHMP3A0A140T963 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF103-CHMP3A0A140T963 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.46■□□□□ 0.07
RNF103-CHMP3A0A140T963 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
RNF103-CHMP3A0A140T963 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF103-CHMP3A0A140T963 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.46■□□□□ 0.07
RNF103-CHMP3A0A140T963 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF103-CHMP3A0A140T963 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
RNF103-CHMP3A0A140T963 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.46■□□□□ 0.07
RNF103-CHMP3A0A140T963 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF103-CHMP3A0A140T963 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.46■□□□□ 0.07
RNF103-CHMP3A0A140T963 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
RNF103-CHMP3A0A140T963 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF103-CHMP3A0A140T963 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF103-CHMP3A0A140T963 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF103-CHMP3A0A140T963 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF103-CHMP3A0A140T963 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF103-CHMP3A0A140T963 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF103-CHMP3A0A140T963 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
RNF103-CHMP3A0A140T963 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF103-CHMP3A0A140T963 CRYGEP-201ENST00000412192 528 ntBASIC15.46■□□□□ 0.07
RNF103-CHMP3A0A140T963 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF103-CHMP3A0A140T963 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.46■□□□□ 0.07
RNF103-CHMP3A0A140T963 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
RNF103-CHMP3A0A140T963 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.46■□□□□ 0.07
RNF103-CHMP3A0A140T963 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF103-CHMP3A0A140T963 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.46■□□□□ 0.07
RNF103-CHMP3A0A140T963 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.46■□□□□ 0.07
RNF103-CHMP3A0A140T963 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RNF103-CHMP3A0A140T963 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.46■□□□□ 0.07
RNF103-CHMP3A0A140T963 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RNF103-CHMP3A0A140T963 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RNF103-CHMP3A0A140T963 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF103-CHMP3A0A140T963 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF103-CHMP3A0A140T963 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
RNF103-CHMP3A0A140T963 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF103-CHMP3A0A140T963 AC136621.1-201ENST00000624017 2304 ntBASIC15.46■□□□□ 0.07
RNF103-CHMP3A0A140T963 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF103-CHMP3A0A140T963 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.46■□□□□ 0.07
RNF103-CHMP3A0A140T963 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.46■□□□□ 0.07
RNF103-CHMP3A0A140T963 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.06
RNF103-CHMP3A0A140T963 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.46■□□□□ 0.06
RNF103-CHMP3A0A140T963 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.46■□□□□ 0.06
RNF103-CHMP3A0A140T963 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.06
RNF103-CHMP3A0A140T963 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
RNF103-CHMP3A0A140T963 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
RNF103-CHMP3A0A140T963 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RNF103-CHMP3A0A140T963 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
RNF103-CHMP3A0A140T963 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RNF103-CHMP3A0A140T963 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.45■□□□□ 0.06
RNF103-CHMP3A0A140T963 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.45■□□□□ 0.06
RNF103-CHMP3A0A140T963 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF103-CHMP3A0A140T963 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF103-CHMP3A0A140T963 AC016027.1-202ENST00000607927 1699 ntBASIC15.45■□□□□ 0.06
RNF103-CHMP3A0A140T963 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.45■□□□□ 0.06
RNF103-CHMP3A0A140T963 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.45■□□□□ 0.06
RNF103-CHMP3A0A140T963 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.45■□□□□ 0.06
RNF103-CHMP3A0A140T963 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms