Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.4■□□□□ 0.06
LRTM1Q9HBL6 AL135744.1-201ENST00000565098 629 ntBASIC15.4■□□□□ 0.06
LRTM1Q9HBL6 AC106730.1-201ENST00000566722 1090 ntBASIC15.4■□□□□ 0.06
LRTM1Q9HBL6 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.4■□□□□ 0.06
LRTM1Q9HBL6 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.4■□□□□ 0.06
LRTM1Q9HBL6 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.4■□□□□ 0.06
LRTM1Q9HBL6 AC027307.2-201ENST00000591252 911 ntBASIC15.4■□□□□ 0.06
LRTM1Q9HBL6 FAM197Y3-203ENST00000618346 717 ntBASIC15.4■□□□□ 0.06
LRTM1Q9HBL6 AC091812.2-201ENST00000619081 385 ntBASIC15.4■□□□□ 0.06
LRTM1Q9HBL6 AC008267.7-201ENST00000624570 1194 ntBASIC15.4■□□□□ 0.06
LRTM1Q9HBL6 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.4■□□□□ 0.06
LRTM1Q9HBL6 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRTM1Q9HBL6 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRTM1Q9HBL6 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRTM1Q9HBL6 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRTM1Q9HBL6 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRTM1Q9HBL6 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRTM1Q9HBL6 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRTM1Q9HBL6 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.4■□□□□ 0.06
LRTM1Q9HBL6 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
LRTM1Q9HBL6 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRTM1Q9HBL6 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRTM1Q9HBL6 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRTM1Q9HBL6 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
LRTM1Q9HBL6 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
LRTM1Q9HBL6 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRTM1Q9HBL6 AC092127.1-201ENST00000567093 3455 ntBASIC15.4■□□□□ 0.06
LRTM1Q9HBL6 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.4■□□□□ 0.06
LRTM1Q9HBL6 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
LRTM1Q9HBL6 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.39■□□□□ 0.05
LRTM1Q9HBL6 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LRTM1Q9HBL6 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
LRTM1Q9HBL6 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.39■□□□□ 0.05
LRTM1Q9HBL6 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
LRTM1Q9HBL6 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRTM1Q9HBL6 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRTM1Q9HBL6 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LRTM1Q9HBL6 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.39■□□□□ 0.05
LRTM1Q9HBL6 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRTM1Q9HBL6 AC023157.3-201ENST00000619086 2088 ntBASIC15.39■□□□□ 0.05
LRTM1Q9HBL6 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
LRTM1Q9HBL6 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRTM1Q9HBL6 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRTM1Q9HBL6 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRTM1Q9HBL6 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
LRTM1Q9HBL6 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.39■□□□□ 0.05
LRTM1Q9HBL6 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.39■□□□□ 0.05
LRTM1Q9HBL6 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
LRTM1Q9HBL6 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
LRTM1Q9HBL6 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.39■□□□□ 0.05
LRTM1Q9HBL6 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.39■□□□□ 0.05
LRTM1Q9HBL6 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.39■□□□□ 0.05
LRTM1Q9HBL6 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.39■□□□□ 0.05
LRTM1Q9HBL6 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.39■□□□□ 0.05
LRTM1Q9HBL6 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.39■□□□□ 0.05
LRTM1Q9HBL6 AC120114.3-201ENST00000611923 658 ntBASIC15.39■□□□□ 0.05
LRTM1Q9HBL6 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.39■□□□□ 0.05
LRTM1Q9HBL6 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
LRTM1Q9HBL6 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.39■□□□□ 0.05
LRTM1Q9HBL6 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
LRTM1Q9HBL6 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRTM1Q9HBL6 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LRTM1Q9HBL6 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRTM1Q9HBL6 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRTM1Q9HBL6 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LRTM1Q9HBL6 AC105250.1-201ENST00000509378 2057 ntBASIC15.39■□□□□ 0.05
LRTM1Q9HBL6 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.39■□□□□ 0.05
LRTM1Q9HBL6 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRTM1Q9HBL6 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.39■□□□□ 0.05
LRTM1Q9HBL6 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRTM1Q9HBL6 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRTM1Q9HBL6 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LRTM1Q9HBL6 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRTM1Q9HBL6 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LRTM1Q9HBL6 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRTM1Q9HBL6 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.38■□□□□ 0.05
LRTM1Q9HBL6 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRTM1Q9HBL6 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.38■□□□□ 0.05
LRTM1Q9HBL6 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.38■□□□□ 0.05
LRTM1Q9HBL6 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRTM1Q9HBL6 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRTM1Q9HBL6 BNIP3P1-202ENST00000550043 1585 ntBASIC15.38■□□□□ 0.05
LRTM1Q9HBL6 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRTM1Q9HBL6 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
LRTM1Q9HBL6 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRTM1Q9HBL6 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LRTM1Q9HBL6 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LRTM1Q9HBL6 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
LRTM1Q9HBL6 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.38■□□□□ 0.05
LRTM1Q9HBL6 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LRTM1Q9HBL6 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.38■□□□□ 0.05
LRTM1Q9HBL6 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRTM1Q9HBL6 FAM86C2P-203ENST00000528684 1004 ntBASIC15.38■□□□□ 0.05
LRTM1Q9HBL6 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.38■□□□□ 0.05
LRTM1Q9HBL6 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LRTM1Q9HBL6 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.38■□□□□ 0.05
LRTM1Q9HBL6 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LRTM1Q9HBL6 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.38■□□□□ 0.05
LRTM1Q9HBL6 AP002414.2-201ENST00000591780 3365 ntBASIC15.38■□□□□ 0.05
LRTM1Q9HBL6 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms