Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AC134684.3-201ENST00000641758 218 ntBASIC15.16■□□□□ 0.02
COL21A1Q96P44 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.16■□□□□ 0.02
COL21A1Q96P44 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
COL21A1Q96P44 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
COL21A1Q96P44 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.16■□□□□ 0.02
COL21A1Q96P44 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
COL21A1Q96P44 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
COL21A1Q96P44 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.16■□□□□ 0.02
COL21A1Q96P44 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
COL21A1Q96P44 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
COL21A1Q96P44 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
COL21A1Q96P44 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.16■□□□□ 0.02
COL21A1Q96P44 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
COL21A1Q96P44 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
COL21A1Q96P44 AC073439.1-201ENST00000624121 1774 ntBASIC15.16■□□□□ 0.02
COL21A1Q96P44 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
COL21A1Q96P44 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
COL21A1Q96P44 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
COL21A1Q96P44 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
COL21A1Q96P44 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.16■□□□□ 0.02
COL21A1Q96P44 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.16■□□□□ 0.02
COL21A1Q96P44 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.16■□□□□ 0.02
COL21A1Q96P44 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
COL21A1Q96P44 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
COL21A1Q96P44 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
COL21A1Q96P44 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
COL21A1Q96P44 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.15■□□□□ 0.02
COL21A1Q96P44 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
COL21A1Q96P44 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
COL21A1Q96P44 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
COL21A1Q96P44 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
COL21A1Q96P44 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
COL21A1Q96P44 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.15■□□□□ 0.02
COL21A1Q96P44 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
COL21A1Q96P44 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.15■□□□□ 0.02
COL21A1Q96P44 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
COL21A1Q96P44 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
COL21A1Q96P44 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
COL21A1Q96P44 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
COL21A1Q96P44 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.15■□□□□ 0.02
COL21A1Q96P44 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
COL21A1Q96P44 SPCS2P4-201ENST00000436160 681 ntBASIC15.15■□□□□ 0.02
COL21A1Q96P44 AL592309.1-201ENST00000443127 649 ntBASIC15.15■□□□□ 0.02
COL21A1Q96P44 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.15■□□□□ 0.02
COL21A1Q96P44 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.15■□□□□ 0.02
COL21A1Q96P44 AP000344.2-201ENST00000512987 629 ntBASIC15.15■□□□□ 0.02
COL21A1Q96P44 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
COL21A1Q96P44 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.15■□□□□ 0.02
COL21A1Q96P44 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.15■□□□□ 0.02
COL21A1Q96P44 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.15■□□□□ 0.02
COL21A1Q96P44 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.15■□□□□ 0.02
COL21A1Q96P44 AC027307.2-201ENST00000591252 911 ntBASIC15.15■□□□□ 0.02
COL21A1Q96P44 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.15■□□□□ 0.02
COL21A1Q96P44 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
COL21A1Q96P44 AL513210.1-201ENST00000629608 234 ntBASIC15.15■□□□□ 0.02
COL21A1Q96P44 AC079781.4-201ENST00000641908 219 ntBASIC15.15■□□□□ 0.02
COL21A1Q96P44 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
COL21A1Q96P44 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
COL21A1Q96P44 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.15■□□□□ 0.02
COL21A1Q96P44 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
COL21A1Q96P44 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
COL21A1Q96P44 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
COL21A1Q96P44 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
COL21A1Q96P44 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
COL21A1Q96P44 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.15■□□□□ 0.02
COL21A1Q96P44 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.15■□□□□ 0.02
COL21A1Q96P44 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
COL21A1Q96P44 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
COL21A1Q96P44 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
COL21A1Q96P44 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
COL21A1Q96P44 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
COL21A1Q96P44 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
COL21A1Q96P44 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
COL21A1Q96P44 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
COL21A1Q96P44 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.15■□□□□ 0.02
COL21A1Q96P44 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
COL21A1Q96P44 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
COL21A1Q96P44 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL21A1Q96P44 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
COL21A1Q96P44 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL21A1Q96P44 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.14■□□□□ 0.01
COL21A1Q96P44 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.14■□□□□ 0.01
COL21A1Q96P44 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL21A1Q96P44 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL21A1Q96P44 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL21A1Q96P44 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL21A1Q96P44 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
COL21A1Q96P44 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL21A1Q96P44 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
COL21A1Q96P44 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
COL21A1Q96P44 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
COL21A1Q96P44 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.14■□□□□ 0.01
COL21A1Q96P44 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.14■□□□□ 0.01
COL21A1Q96P44 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL21A1Q96P44 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.14■□□□□ 0.01
COL21A1Q96P44 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.14■□□□□ 0.01
COL21A1Q96P44 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL21A1Q96P44 AC254562.1-201ENST00000417586 456 ntBASIC15.14■□□□□ 0.01
COL21A1Q96P44 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.14■□□□□ 0.01
COL21A1Q96P44 AC093724.1-201ENST00000448659 1027 ntBASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms