Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
NBPF4Q96M43 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NBPF4Q96M43 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC20.78■□□□□ 0.92
NBPF4Q96M43 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC20.78■□□□□ 0.92
NBPF4Q96M43 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NBPF4Q96M43 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NBPF4Q96M43 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
NBPF4Q96M43 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NBPF4Q96M43 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
NBPF4Q96M43 AC011477.6-201ENST00000604980 1927 ntBASIC20.78■□□□□ 0.92
NBPF4Q96M43 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NBPF4Q96M43 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NBPF4Q96M43 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NBPF4Q96M43 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NBPF4Q96M43 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NBPF4Q96M43 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NBPF4Q96M43 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NBPF4Q96M43 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NBPF4Q96M43 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NBPF4Q96M43 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NBPF4Q96M43 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NBPF4Q96M43 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC20.77■□□□□ 0.92
NBPF4Q96M43 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
NBPF4Q96M43 AC092364.2-201ENST00000596710 2692 ntBASIC20.77■□□□□ 0.92
NBPF4Q96M43 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NBPF4Q96M43 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
NBPF4Q96M43 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
NBPF4Q96M43 MIR648-201ENST00000385046 94 ntBASIC20.77■□□□□ 0.92
NBPF4Q96M43 AL133267.1-201ENST00000398220 340 ntBASIC20.77■□□□□ 0.92
NBPF4Q96M43 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC20.77■□□□□ 0.92
NBPF4Q96M43 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NBPF4Q96M43 AP001582.1-201ENST00000525856 295 ntBASIC20.77■□□□□ 0.92
NBPF4Q96M43 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC20.77■□□□□ 0.92
NBPF4Q96M43 KSR1-207ENST00000578981 748 ntTSL 4 BASIC20.77■□□□□ 0.92
NBPF4Q96M43 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC20.77■□□□□ 0.92
NBPF4Q96M43 AC244093.1-201ENST00000610837 814 ntBASIC20.77■□□□□ 0.92
NBPF4Q96M43 AC008687.7-202ENST00000637404 953 ntBASIC20.77■□□□□ 0.92
NBPF4Q96M43 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
NBPF4Q96M43 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
NBPF4Q96M43 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NBPF4Q96M43 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC20.77■□□□□ 0.92
NBPF4Q96M43 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NBPF4Q96M43 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
NBPF4Q96M43 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC20.76■□□□□ 0.91
NBPF4Q96M43 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NBPF4Q96M43 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NBPF4Q96M43 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
NBPF4Q96M43 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
NBPF4Q96M43 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
NBPF4Q96M43 POLL-217ENST00000628479 1953 ntTSL 5 BASIC20.76■□□□□ 0.91
NBPF4Q96M43 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC20.76■□□□□ 0.91
NBPF4Q96M43 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NBPF4Q96M43 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
NBPF4Q96M43 RAC2-202ENST00000401529 569 ntTSL 4 BASIC20.76■□□□□ 0.91
NBPF4Q96M43 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
NBPF4Q96M43 YBX1P6-201ENST00000442962 1002 ntBASIC20.76■□□□□ 0.91
NBPF4Q96M43 DUX4L45-201ENST00000566406 1057 ntBASIC20.76■□□□□ 0.91
NBPF4Q96M43 AC025279.2-201ENST00000569730 653 ntBASIC20.76■□□□□ 0.91
NBPF4Q96M43 AC010328.2-201ENST00000597698 1111 ntBASIC20.76■□□□□ 0.91
NBPF4Q96M43 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NBPF4Q96M43 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NBPF4Q96M43 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
NBPF4Q96M43 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NBPF4Q96M43 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
NBPF4Q96M43 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NBPF4Q96M43 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NBPF4Q96M43 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NBPF4Q96M43 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
NBPF4Q96M43 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC20.76■□□□□ 0.91
NBPF4Q96M43 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
NBPF4Q96M43 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NBPF4Q96M43 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NBPF4Q96M43 AD000864.1-201ENST00000624076 2295 ntBASIC20.75■□□□□ 0.91
NBPF4Q96M43 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
NBPF4Q96M43 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC20.75■□□□□ 0.91
NBPF4Q96M43 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NBPF4Q96M43 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NBPF4Q96M43 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NBPF4Q96M43 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NBPF4Q96M43 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NBPF4Q96M43 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
NBPF4Q96M43 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NBPF4Q96M43 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC20.75■□□□□ 0.91
NBPF4Q96M43 OLR1-203ENST00000432556 950 ntTSL 2 BASIC20.75■□□□□ 0.91
NBPF4Q96M43 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NBPF4Q96M43 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC20.75■□□□□ 0.91
NBPF4Q96M43 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC20.75■□□□□ 0.91
NBPF4Q96M43 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC20.75■□□□□ 0.91
NBPF4Q96M43 AC079316.1-201ENST00000548397 411 ntBASIC20.75■□□□□ 0.91
NBPF4Q96M43 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC20.75■□□□□ 0.91
NBPF4Q96M43 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC20.75■□□□□ 0.91
NBPF4Q96M43 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NBPF4Q96M43 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
NBPF4Q96M43 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NBPF4Q96M43 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC20.75■□□□□ 0.91
NBPF4Q96M43 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
NBPF4Q96M43 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NBPF4Q96M43 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC20.75■□□□□ 0.91
NBPF4Q96M43 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NBPF4Q96M43 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms