Protein–RNA interactions for Protein: Q96JS3

PGBD1, PiggyBac transposable element-derived protein 1, humanhuman

Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1Q96JS3 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
PGBD1Q96JS3 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PGBD1Q96JS3 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PGBD1Q96JS3 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PGBD1Q96JS3 AL513477.1-201ENST00000602865 2407 ntBASIC18.54■□□□□ 0.56
PGBD1Q96JS3 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PGBD1Q96JS3 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC18.54■□□□□ 0.56
PGBD1Q96JS3 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC18.54■□□□□ 0.56
PGBD1Q96JS3 PGR-210ENST00000619228 3038 ntTSL 5 BASIC18.54■□□□□ 0.56
PGBD1Q96JS3 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PGBD1Q96JS3 BAD-202ENST00000394531 631 ntTSL 3 BASIC18.54■□□□□ 0.56
PGBD1Q96JS3 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.54■□□□□ 0.56
PGBD1Q96JS3 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC18.54■□□□□ 0.56
PGBD1Q96JS3 AC107890.1-201ENST00000422478 521 ntBASIC18.54■□□□□ 0.56
PGBD1Q96JS3 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
PGBD1Q96JS3 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC18.54■□□□□ 0.56
PGBD1Q96JS3 BAD-207ENST00000544785 525 ntTSL 3 BASIC18.54■□□□□ 0.56
PGBD1Q96JS3 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC18.54■□□□□ 0.56
PGBD1Q96JS3 AC105021.1-202ENST00000570572 669 ntBASIC18.54■□□□□ 0.56
PGBD1Q96JS3 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PGBD1Q96JS3 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.54■□□□□ 0.56
PGBD1Q96JS3 AC007967.4-201ENST00000614700 386 ntBASIC18.54■□□□□ 0.56
PGBD1Q96JS3 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.54■□□□□ 0.56
PGBD1Q96JS3 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PGBD1Q96JS3 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC18.54■□□□□ 0.56
PGBD1Q96JS3 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PGBD1Q96JS3 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC18.54■□□□□ 0.56
PGBD1Q96JS3 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PGBD1Q96JS3 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC18.54■□□□□ 0.56
PGBD1Q96JS3 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PGBD1Q96JS3 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC18.54■□□□□ 0.56
PGBD1Q96JS3 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PGBD1Q96JS3 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
PGBD1Q96JS3 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PGBD1Q96JS3 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PGBD1Q96JS3 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.53■□□□□ 0.56
PGBD1Q96JS3 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PGBD1Q96JS3 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC18.53■□□□□ 0.56
PGBD1Q96JS3 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC18.53■□□□□ 0.56
PGBD1Q96JS3 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
PGBD1Q96JS3 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PGBD1Q96JS3 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
PGBD1Q96JS3 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC18.53■□□□□ 0.56
PGBD1Q96JS3 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PGBD1Q96JS3 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
PGBD1Q96JS3 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PGBD1Q96JS3 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PGBD1Q96JS3 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PGBD1Q96JS3 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PGBD1Q96JS3 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PGBD1Q96JS3 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PGBD1Q96JS3 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
PGBD1Q96JS3 HAUS4P1-201ENST00000406739 1145 ntBASIC18.53■□□□□ 0.56
PGBD1Q96JS3 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PGBD1Q96JS3 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC18.53■□□□□ 0.56
PGBD1Q96JS3 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC18.53■□□□□ 0.56
PGBD1Q96JS3 MDH2-205ENST00000461263 648 ntTSL 2 BASIC18.53■□□□□ 0.56
PGBD1Q96JS3 SATB1-217ENST00000493952 626 ntTSL 3 BASIC18.53■□□□□ 0.56
PGBD1Q96JS3 SPDYE12P-201ENST00000618416 771 ntBASIC18.53■□□□□ 0.56
PGBD1Q96JS3 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
PGBD1Q96JS3 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.53■□□□□ 0.56
PGBD1Q96JS3 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PGBD1Q96JS3 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PGBD1Q96JS3 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PGBD1Q96JS3 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
PGBD1Q96JS3 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PGBD1Q96JS3 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
PGBD1Q96JS3 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PGBD1Q96JS3 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PGBD1Q96JS3 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PGBD1Q96JS3 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC18.53■□□□□ 0.56
PGBD1Q96JS3 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PGBD1Q96JS3 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PGBD1Q96JS3 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
PGBD1Q96JS3 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC18.52■□□□□ 0.56
PGBD1Q96JS3 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PGBD1Q96JS3 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
PGBD1Q96JS3 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC18.52■□□□□ 0.56
PGBD1Q96JS3 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PGBD1Q96JS3 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PGBD1Q96JS3 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PGBD1Q96JS3 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PGBD1Q96JS3 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC18.52■□□□□ 0.56
PGBD1Q96JS3 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PGBD1Q96JS3 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
PGBD1Q96JS3 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PGBD1Q96JS3 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
PGBD1Q96JS3 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PGBD1Q96JS3 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.52■□□□□ 0.56
PGBD1Q96JS3 AL353705.2-201ENST00000428243 662 ntBASIC18.52■□□□□ 0.56
PGBD1Q96JS3 AC092580.3-201ENST00000430932 139 ntBASIC18.52■□□□□ 0.56
PGBD1Q96JS3 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18.52■□□□□ 0.56
PGBD1Q96JS3 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.52■□□□□ 0.56
PGBD1Q96JS3 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PGBD1Q96JS3 AC067863.1-201ENST00000494933 530 ntBASIC18.52■□□□□ 0.56
PGBD1Q96JS3 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC18.52■□□□□ 0.56
PGBD1Q96JS3 AC140878.1-201ENST00000565277 250 ntBASIC18.52■□□□□ 0.56
PGBD1Q96JS3 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
PGBD1Q96JS3 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC18.52■□□□□ 0.56
PGBD1Q96JS3 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms