Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHAMP1Q96JM3 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHAMP1Q96JM3 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHAMP1Q96JM3 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.54■□□□□ 0.56
CHAMP1Q96JM3 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHAMP1Q96JM3 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
CHAMP1Q96JM3 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC18.54■□□□□ 0.56
CHAMP1Q96JM3 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC18.54■□□□□ 0.56
CHAMP1Q96JM3 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CHAMP1Q96JM3 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.54■□□□□ 0.56
CHAMP1Q96JM3 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHAMP1Q96JM3 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHAMP1Q96JM3 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHAMP1Q96JM3 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHAMP1Q96JM3 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC18.54■□□□□ 0.56
CHAMP1Q96JM3 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHAMP1Q96JM3 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHAMP1Q96JM3 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
CHAMP1Q96JM3 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CHAMP1Q96JM3 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC18.54■□□□□ 0.56
CHAMP1Q96JM3 KRT18P34-201ENST00000488218 1270 ntBASIC18.54■□□□□ 0.56
CHAMP1Q96JM3 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.54■□□□□ 0.56
CHAMP1Q96JM3 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC18.54■□□□□ 0.56
CHAMP1Q96JM3 IGHV3-22-201ENST00000520721 359 ntBASIC18.54■□□□□ 0.56
CHAMP1Q96JM3 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.54■□□□□ 0.56
CHAMP1Q96JM3 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.54■□□□□ 0.56
CHAMP1Q96JM3 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.54■□□□□ 0.56
CHAMP1Q96JM3 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHAMP1Q96JM3 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
CHAMP1Q96JM3 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.54■□□□□ 0.56
CHAMP1Q96JM3 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.54■□□□□ 0.56
CHAMP1Q96JM3 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC18.54■□□□□ 0.56
CHAMP1Q96JM3 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
CHAMP1Q96JM3 BNIP3P1-202ENST00000550043 1585 ntBASIC18.54■□□□□ 0.56
CHAMP1Q96JM3 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CHAMP1Q96JM3 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHAMP1Q96JM3 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHAMP1Q96JM3 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC18.54■□□□□ 0.56
CHAMP1Q96JM3 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.54■□□□□ 0.56
CHAMP1Q96JM3 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC18.54■□□□□ 0.56
CHAMP1Q96JM3 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHAMP1Q96JM3 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC18.54■□□□□ 0.56
CHAMP1Q96JM3 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHAMP1Q96JM3 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHAMP1Q96JM3 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHAMP1Q96JM3 C1R-202ENST00000536053 2347 ntTSL 2 BASIC18.54■□□□□ 0.56
CHAMP1Q96JM3 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHAMP1Q96JM3 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHAMP1Q96JM3 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHAMP1Q96JM3 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHAMP1Q96JM3 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHAMP1Q96JM3 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHAMP1Q96JM3 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHAMP1Q96JM3 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CHAMP1Q96JM3 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHAMP1Q96JM3 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC18.53■□□□□ 0.56
CHAMP1Q96JM3 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHAMP1Q96JM3 PARN-202ENST00000420015 2360 ntTSL 2 BASIC18.53■□□□□ 0.56
CHAMP1Q96JM3 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.53■□□□□ 0.56
CHAMP1Q96JM3 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
CHAMP1Q96JM3 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.53■□□□□ 0.56
CHAMP1Q96JM3 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHAMP1Q96JM3 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHAMP1Q96JM3 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHAMP1Q96JM3 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHAMP1Q96JM3 CRYGEP-201ENST00000412192 528 ntBASIC18.53■□□□□ 0.56
CHAMP1Q96JM3 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.53■□□□□ 0.56
CHAMP1Q96JM3 CFL1-212ENST00000531413 636 ntTSL 3 BASIC18.53■□□□□ 0.56
CHAMP1Q96JM3 AC096734.2-201ENST00000562054 433 ntBASIC18.53■□□□□ 0.56
CHAMP1Q96JM3 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.53■□□□□ 0.56
CHAMP1Q96JM3 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.53■□□□□ 0.56
CHAMP1Q96JM3 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.53■□□□□ 0.56
CHAMP1Q96JM3 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.53■□□□□ 0.56
CHAMP1Q96JM3 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHAMP1Q96JM3 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHAMP1Q96JM3 MARS-233ENST00000628866 2583 ntTSL 5 BASIC18.53■□□□□ 0.56
CHAMP1Q96JM3 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CHAMP1Q96JM3 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.53■□□□□ 0.56
CHAMP1Q96JM3 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CHAMP1Q96JM3 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHAMP1Q96JM3 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHAMP1Q96JM3 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC18.53■□□□□ 0.56
CHAMP1Q96JM3 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHAMP1Q96JM3 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
CHAMP1Q96JM3 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHAMP1Q96JM3 AL359258.3-201ENST00000622910 2331 ntBASIC18.52■□□□□ 0.56
CHAMP1Q96JM3 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHAMP1Q96JM3 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHAMP1Q96JM3 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHAMP1Q96JM3 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CHAMP1Q96JM3 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC18.52■□□□□ 0.56
CHAMP1Q96JM3 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHAMP1Q96JM3 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
CHAMP1Q96JM3 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CHAMP1Q96JM3 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.52■□□□□ 0.56
CHAMP1Q96JM3 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CHAMP1Q96JM3 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.52■□□□□ 0.56
CHAMP1Q96JM3 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
CHAMP1Q96JM3 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.52■□□□□ 0.56
CHAMP1Q96JM3 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms