Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP2A3Q93084 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP2A3Q93084 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP2A3Q93084 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.87■□□□□ 0.29
ATP2A3Q93084 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ATP2A3Q93084 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP2A3Q93084 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ATP2A3Q93084 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP2A3Q93084 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ATP2A3Q93084 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ATP2A3Q93084 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.87■□□□□ 0.29
ATP2A3Q93084 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ATP2A3Q93084 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.87■□□□□ 0.29
ATP2A3Q93084 AC093724.1-201ENST00000448659 1027 ntBASIC16.87■□□□□ 0.29
ATP2A3Q93084 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ATP2A3Q93084 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ATP2A3Q93084 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP2A3Q93084 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP2A3Q93084 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.87■□□□□ 0.29
ATP2A3Q93084 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.87■□□□□ 0.29
ATP2A3Q93084 BANF1P1-201ENST00000553684 263 ntBASIC16.87■□□□□ 0.29
ATP2A3Q93084 SPDYE22P-201ENST00000582158 798 ntBASIC16.87■□□□□ 0.29
ATP2A3Q93084 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP2A3Q93084 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.87■□□□□ 0.29
ATP2A3Q93084 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.87■□□□□ 0.29
ATP2A3Q93084 AL662799.1-202ENST00000614205 422 ntBASIC16.87■□□□□ 0.29
ATP2A3Q93084 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.87■□□□□ 0.29
ATP2A3Q93084 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.87■□□□□ 0.29
ATP2A3Q93084 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.87■□□□□ 0.29
ATP2A3Q93084 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
ATP2A3Q93084 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.87■□□□□ 0.29
ATP2A3Q93084 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP2A3Q93084 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ATP2A3Q93084 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP2A3Q93084 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.87■□□□□ 0.29
ATP2A3Q93084 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.87■□□□□ 0.29
ATP2A3Q93084 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.87■□□□□ 0.29
ATP2A3Q93084 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP2A3Q93084 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP2A3Q93084 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.87■□□□□ 0.29
ATP2A3Q93084 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP2A3Q93084 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
ATP2A3Q93084 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
ATP2A3Q93084 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP2A3Q93084 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ATP2A3Q93084 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP2A3Q93084 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP2A3Q93084 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP2A3Q93084 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
ATP2A3Q93084 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP2A3Q93084 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
ATP2A3Q93084 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.86■□□□□ 0.29
ATP2A3Q93084 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP2A3Q93084 MIR600HG-201ENST00000449175 5984 ntBASIC16.86■□□□□ 0.29
ATP2A3Q93084 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP2A3Q93084 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP2A3Q93084 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP2A3Q93084 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP2A3Q93084 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.86■□□□□ 0.29
ATP2A3Q93084 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
ATP2A3Q93084 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP2A3Q93084 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.86■□□□□ 0.29
ATP2A3Q93084 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.86■□□□□ 0.29
ATP2A3Q93084 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP2A3Q93084 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.86■□□□□ 0.29
ATP2A3Q93084 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP2A3Q93084 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP2A3Q93084 SPTLC1P1-201ENST00000447199 261 ntBASIC16.86■□□□□ 0.29
ATP2A3Q93084 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.86■□□□□ 0.29
ATP2A3Q93084 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
ATP2A3Q93084 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.86■□□□□ 0.29
ATP2A3Q93084 AL079307.3-201ENST00000556114 283 ntBASIC16.86■□□□□ 0.29
ATP2A3Q93084 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.86■□□□□ 0.29
ATP2A3Q93084 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.86■□□□□ 0.29
ATP2A3Q93084 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ATP2A3Q93084 AL512652.2-201ENST00000625156 1716 ntBASIC16.86■□□□□ 0.29
ATP2A3Q93084 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP2A3Q93084 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP2A3Q93084 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.86■□□□□ 0.29
ATP2A3Q93084 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.86■□□□□ 0.29
ATP2A3Q93084 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP2A3Q93084 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP2A3Q93084 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ATP2A3Q93084 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP2A3Q93084 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ATP2A3Q93084 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP2A3Q93084 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP2A3Q93084 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP2A3Q93084 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.86■□□□□ 0.29
ATP2A3Q93084 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP2A3Q93084 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP2A3Q93084 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP2A3Q93084 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.86■□□□□ 0.29
ATP2A3Q93084 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
ATP2A3Q93084 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP2A3Q93084 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
ATP2A3Q93084 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.85■□□□□ 0.29
ATP2A3Q93084 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.85■□□□□ 0.29
ATP2A3Q93084 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
ATP2A3Q93084 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms