Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RTN4IP1Q8WWV3 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
RTN4IP1Q8WWV3 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RTN4IP1Q8WWV3 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
RTN4IP1Q8WWV3 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RTN4IP1Q8WWV3 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
RTN4IP1Q8WWV3 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RTN4IP1Q8WWV3 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
RTN4IP1Q8WWV3 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RTN4IP1Q8WWV3 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
RTN4IP1Q8WWV3 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RTN4IP1Q8WWV3 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
RTN4IP1Q8WWV3 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
RTN4IP1Q8WWV3 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.52□□□□□ -0.25
RTN4IP1Q8WWV3 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
RTN4IP1Q8WWV3 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
RTN4IP1Q8WWV3 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
RTN4IP1Q8WWV3 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RTN4IP1Q8WWV3 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
RTN4IP1Q8WWV3 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
RTN4IP1Q8WWV3 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.51□□□□□ -0.25
RTN4IP1Q8WWV3 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
RTN4IP1Q8WWV3 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RTN4IP1Q8WWV3 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
RTN4IP1Q8WWV3 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.51□□□□□ -0.25
RTN4IP1Q8WWV3 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RTN4IP1Q8WWV3 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.51□□□□□ -0.25
RTN4IP1Q8WWV3 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
RTN4IP1Q8WWV3 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RTN4IP1Q8WWV3 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC13.51□□□□□ -0.25
RTN4IP1Q8WWV3 AC087481.3-201ENST00000602886 1894 ntBASIC13.51□□□□□ -0.25
RTN4IP1Q8WWV3 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
RTN4IP1Q8WWV3 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RTN4IP1Q8WWV3 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC13.51□□□□□ -0.25
RTN4IP1Q8WWV3 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC13.51□□□□□ -0.25
RTN4IP1Q8WWV3 AC008677.1-201ENST00000519230 1561 ntBASIC13.51□□□□□ -0.25
RTN4IP1Q8WWV3 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
RTN4IP1Q8WWV3 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RTN4IP1Q8WWV3 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RTN4IP1Q8WWV3 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RTN4IP1Q8WWV3 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
RTN4IP1Q8WWV3 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
RTN4IP1Q8WWV3 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
RTN4IP1Q8WWV3 HMGA1P7-201ENST00000406908 502 ntBASIC13.51□□□□□ -0.25
RTN4IP1Q8WWV3 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
RTN4IP1Q8WWV3 SLC25A1P1-201ENST00000528351 927 ntBASIC13.51□□□□□ -0.25
RTN4IP1Q8WWV3 AC106730.1-201ENST00000566722 1090 ntBASIC13.51□□□□□ -0.25
RTN4IP1Q8WWV3 CAND2-206ENST00000626378 333 ntTSL 5 BASIC13.51□□□□□ -0.25
RTN4IP1Q8WWV3 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RTN4IP1Q8WWV3 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.51□□□□□ -0.25
RTN4IP1Q8WWV3 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RTN4IP1Q8WWV3 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RTN4IP1Q8WWV3 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RTN4IP1Q8WWV3 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RTN4IP1Q8WWV3 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RTN4IP1Q8WWV3 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
RTN4IP1Q8WWV3 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RTN4IP1Q8WWV3 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RTN4IP1Q8WWV3 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RTN4IP1Q8WWV3 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.51□□□□□ -0.25
RTN4IP1Q8WWV3 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RTN4IP1Q8WWV3 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.51□□□□□ -0.25
RTN4IP1Q8WWV3 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RTN4IP1Q8WWV3 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.5□□□□□ -0.25
RTN4IP1Q8WWV3 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RTN4IP1Q8WWV3 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RTN4IP1Q8WWV3 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RTN4IP1Q8WWV3 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RTN4IP1Q8WWV3 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RTN4IP1Q8WWV3 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RTN4IP1Q8WWV3 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
RTN4IP1Q8WWV3 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
RTN4IP1Q8WWV3 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RTN4IP1Q8WWV3 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RTN4IP1Q8WWV3 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
RTN4IP1Q8WWV3 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RTN4IP1Q8WWV3 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13.5□□□□□ -0.25
RTN4IP1Q8WWV3 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC13.5□□□□□ -0.25
RTN4IP1Q8WWV3 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RTN4IP1Q8WWV3 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
RTN4IP1Q8WWV3 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
RTN4IP1Q8WWV3 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
RTN4IP1Q8WWV3 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RTN4IP1Q8WWV3 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RTN4IP1Q8WWV3 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RTN4IP1Q8WWV3 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.5□□□□□ -0.25
RTN4IP1Q8WWV3 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RTN4IP1Q8WWV3 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.5□□□□□ -0.25
RTN4IP1Q8WWV3 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
RTN4IP1Q8WWV3 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RTN4IP1Q8WWV3 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RTN4IP1Q8WWV3 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
RTN4IP1Q8WWV3 TEX30-205ENST00000376029 959 ntTSL 2 BASIC13.5□□□□□ -0.25
RTN4IP1Q8WWV3 RNU1-129P-201ENST00000384064 167 ntBASIC13.5□□□□□ -0.25
RTN4IP1Q8WWV3 DDT-204ENST00000404092 805 ntTSL 3 BASIC13.5□□□□□ -0.25
RTN4IP1Q8WWV3 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
RTN4IP1Q8WWV3 AL591424.1-201ENST00000442569 1213 ntBASIC13.5□□□□□ -0.25
RTN4IP1Q8WWV3 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RTN4IP1Q8WWV3 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC13.5□□□□□ -0.25
RTN4IP1Q8WWV3 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms