Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC9.65□□□□□ -0.86
VPS13BQ7Z7G8 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
VPS13BQ7Z7G8 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
VPS13BQ7Z7G8 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
VPS13BQ7Z7G8 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
VPS13BQ7Z7G8 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
VPS13BQ7Z7G8 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
VPS13BQ7Z7G8 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC9.65□□□□□ -0.86
VPS13BQ7Z7G8 KRTAP10-13P-201ENST00000412914 571 ntBASIC9.65□□□□□ -0.86
VPS13BQ7Z7G8 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC9.65□□□□□ -0.86
VPS13BQ7Z7G8 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC9.65□□□□□ -0.86
VPS13BQ7Z7G8 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC9.65□□□□□ -0.86
VPS13BQ7Z7G8 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
VPS13BQ7Z7G8 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
VPS13BQ7Z7G8 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
VPS13BQ7Z7G8 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
VPS13BQ7Z7G8 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
VPS13BQ7Z7G8 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
VPS13BQ7Z7G8 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
VPS13BQ7Z7G8 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
VPS13BQ7Z7G8 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC9.65□□□□□ -0.87
VPS13BQ7Z7G8 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC9.65□□□□□ -0.87
VPS13BQ7Z7G8 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
VPS13BQ7Z7G8 HLA-DQB2-229ENST00000411527 1059 ntBASIC9.65□□□□□ -0.87
VPS13BQ7Z7G8 CD8B2-202ENST00000417670 633 ntBASIC9.65□□□□□ -0.87
VPS13BQ7Z7G8 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC9.65□□□□□ -0.87
VPS13BQ7Z7G8 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC9.65□□□□□ -0.87
VPS13BQ7Z7G8 AC044849.1-201ENST00000519737 1188 ntBASIC9.65□□□□□ -0.87
VPS13BQ7Z7G8 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC9.65□□□□□ -0.87
VPS13BQ7Z7G8 GPX4-206ENST00000588919 803 ntTSL 2 BASIC9.65□□□□□ -0.87
VPS13BQ7Z7G8 AC138649.2-201ENST00000615886 705 ntBASIC9.65□□□□□ -0.87
VPS13BQ7Z7G8 AC006453.4-201ENST00000636949 1252 ntBASIC9.65□□□□□ -0.87
VPS13BQ7Z7G8 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
VPS13BQ7Z7G8 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.87
VPS13BQ7Z7G8 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
VPS13BQ7Z7G8 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
VPS13BQ7Z7G8 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC9.64□□□□□ -0.87
VPS13BQ7Z7G8 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
VPS13BQ7Z7G8 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
VPS13BQ7Z7G8 AL139384.1-201ENST00000612143 3047 ntBASIC9.64□□□□□ -0.87
VPS13BQ7Z7G8 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
VPS13BQ7Z7G8 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
VPS13BQ7Z7G8 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
VPS13BQ7Z7G8 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
VPS13BQ7Z7G8 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
VPS13BQ7Z7G8 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC9.64□□□□□ -0.87
VPS13BQ7Z7G8 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
VPS13BQ7Z7G8 HIST2H2BB-201ENST00000449108 381 ntBASIC9.64□□□□□ -0.87
VPS13BQ7Z7G8 ARTN-209ENST00000479128 471 ntTSL 3 BASIC9.64□□□□□ -0.87
VPS13BQ7Z7G8 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
VPS13BQ7Z7G8 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC9.64□□□□□ -0.87
VPS13BQ7Z7G8 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
VPS13BQ7Z7G8 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC9.64□□□□□ -0.87
VPS13BQ7Z7G8 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
VPS13BQ7Z7G8 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
VPS13BQ7Z7G8 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
VPS13BQ7Z7G8 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC9.64□□□□□ -0.87
VPS13BQ7Z7G8 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
VPS13BQ7Z7G8 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
VPS13BQ7Z7G8 MSRA-203ENST00000441698 788 ntTSL 2 BASIC9.64□□□□□ -0.87
VPS13BQ7Z7G8 USP40-206ENST00000443711 628 ntTSL 2 BASIC9.64□□□□□ -0.87
VPS13BQ7Z7G8 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
VPS13BQ7Z7G8 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC9.64□□□□□ -0.87
VPS13BQ7Z7G8 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
VPS13BQ7Z7G8 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC9.64□□□□□ -0.87
VPS13BQ7Z7G8 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC9.64□□□□□ -0.87
VPS13BQ7Z7G8 AC091812.3-201ENST00000621362 345 ntBASIC9.64□□□□□ -0.87
VPS13BQ7Z7G8 YRDCP1-201ENST00000621419 643 ntBASIC9.64□□□□□ -0.87
VPS13BQ7Z7G8 KRT8P35-201ENST00000483942 1338 ntBASIC9.64□□□□□ -0.87
VPS13BQ7Z7G8 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC9.64□□□□□ -0.87
VPS13BQ7Z7G8 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
VPS13BQ7Z7G8 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC9.64□□□□□ -0.87
VPS13BQ7Z7G8 AC008132.1-202ENST00000342005 1389 ntBASIC9.64□□□□□ -0.87
VPS13BQ7Z7G8 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
VPS13BQ7Z7G8 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC9.64□□□□□ -0.87
VPS13BQ7Z7G8 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
VPS13BQ7Z7G8 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
VPS13BQ7Z7G8 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC9.64□□□□□ -0.87
VPS13BQ7Z7G8 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
VPS13BQ7Z7G8 AC022137.2-201ENST00000503482 481 ntBASIC9.64□□□□□ -0.87
VPS13BQ7Z7G8 AC011491.1-203ENST00000637688 543 ntBASIC9.64□□□□□ -0.87
VPS13BQ7Z7G8 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC9.64□□□□□ -0.87
VPS13BQ7Z7G8 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC9.64□□□□□ -0.87
VPS13BQ7Z7G8 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
VPS13BQ7Z7G8 NKILA-202ENST00000614771 2598 ntBASIC9.64□□□□□ -0.87
VPS13BQ7Z7G8 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
VPS13BQ7Z7G8 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC9.63□□□□□ -0.87
VPS13BQ7Z7G8 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
VPS13BQ7Z7G8 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
VPS13BQ7Z7G8 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
VPS13BQ7Z7G8 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
VPS13BQ7Z7G8 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
VPS13BQ7Z7G8 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
VPS13BQ7Z7G8 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC9.63□□□□□ -0.87
VPS13BQ7Z7G8 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
VPS13BQ7Z7G8 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
VPS13BQ7Z7G8 RN7SL11P-201ENST00000471305 293 ntBASIC9.63□□□□□ -0.87
VPS13BQ7Z7G8 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC9.63□□□□□ -0.87
VPS13BQ7Z7G8 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC9.63□□□□□ -0.87
VPS13BQ7Z7G8 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC9.63□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms