Protein–RNA interactions for Protein: Q5VZ89

DENND4C, DENN domain-containing protein 4C, humanhuman

Predictions only

Length 1,909 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4CQ5VZ89 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
DENND4CQ5VZ89 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
DENND4CQ5VZ89 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DENND4CQ5VZ89 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
DENND4CQ5VZ89 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DENND4CQ5VZ89 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
DENND4CQ5VZ89 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DENND4CQ5VZ89 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
DENND4CQ5VZ89 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
DENND4CQ5VZ89 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
DENND4CQ5VZ89 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
DENND4CQ5VZ89 AC004066.1-201ENST00000502488 802 ntBASIC16.09■□□□□ 0.17
DENND4CQ5VZ89 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC16.09■□□□□ 0.17
DENND4CQ5VZ89 AC145423.3-201ENST00000615987 467 ntBASIC16.09■□□□□ 0.17
DENND4CQ5VZ89 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.09■□□□□ 0.17
DENND4CQ5VZ89 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
DENND4CQ5VZ89 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.09■□□□□ 0.17
DENND4CQ5VZ89 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
DENND4CQ5VZ89 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
DENND4CQ5VZ89 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC16.09■□□□□ 0.17
DENND4CQ5VZ89 AC084364.1-201ENST00000551967 1556 ntBASIC16.09■□□□□ 0.17
DENND4CQ5VZ89 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
DENND4CQ5VZ89 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.09■□□□□ 0.17
DENND4CQ5VZ89 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
DENND4CQ5VZ89 EIF3FP3-201ENST00000434851 1086 ntBASIC16.09■□□□□ 0.17
DENND4CQ5VZ89 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16.09■□□□□ 0.17
DENND4CQ5VZ89 KRT18P25-201ENST00000508931 1278 ntBASIC16.09■□□□□ 0.17
DENND4CQ5VZ89 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.09■□□□□ 0.17
DENND4CQ5VZ89 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC16.09■□□□□ 0.17
DENND4CQ5VZ89 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC16.09■□□□□ 0.17
DENND4CQ5VZ89 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
DENND4CQ5VZ89 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DENND4CQ5VZ89 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DENND4CQ5VZ89 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
DENND4CQ5VZ89 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.09■□□□□ 0.17
DENND4CQ5VZ89 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.09■□□□□ 0.17
DENND4CQ5VZ89 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DENND4CQ5VZ89 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.09■□□□□ 0.17
DENND4CQ5VZ89 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
DENND4CQ5VZ89 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
DENND4CQ5VZ89 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
DENND4CQ5VZ89 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
DENND4CQ5VZ89 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
DENND4CQ5VZ89 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
DENND4CQ5VZ89 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
DENND4CQ5VZ89 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
DENND4CQ5VZ89 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.08■□□□□ 0.16
DENND4CQ5VZ89 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC16.08■□□□□ 0.16
DENND4CQ5VZ89 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.08■□□□□ 0.16
DENND4CQ5VZ89 MTX1P1-201ENST00000440904 838 ntBASIC16.08■□□□□ 0.16
DENND4CQ5VZ89 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.08■□□□□ 0.16
DENND4CQ5VZ89 AHRR-211ENST00000515206 462 ntTSL 5 BASIC16.08■□□□□ 0.16
DENND4CQ5VZ89 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
DENND4CQ5VZ89 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC16.08■□□□□ 0.16
DENND4CQ5VZ89 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC16.08■□□□□ 0.16
DENND4CQ5VZ89 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.08■□□□□ 0.16
DENND4CQ5VZ89 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.08■□□□□ 0.16
DENND4CQ5VZ89 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.08■□□□□ 0.16
DENND4CQ5VZ89 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
DENND4CQ5VZ89 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.08■□□□□ 0.16
DENND4CQ5VZ89 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.08■□□□□ 0.16
DENND4CQ5VZ89 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.08■□□□□ 0.16
DENND4CQ5VZ89 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
DENND4CQ5VZ89 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
DENND4CQ5VZ89 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
DENND4CQ5VZ89 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.08■□□□□ 0.16
DENND4CQ5VZ89 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.08■□□□□ 0.16
DENND4CQ5VZ89 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
DENND4CQ5VZ89 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
DENND4CQ5VZ89 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
DENND4CQ5VZ89 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
DENND4CQ5VZ89 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
DENND4CQ5VZ89 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.08■□□□□ 0.16
DENND4CQ5VZ89 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
DENND4CQ5VZ89 BRWD1P1-201ENST00000401091 371 ntBASIC16.07■□□□□ 0.16
DENND4CQ5VZ89 BCYRN1-201ENST00000418539 200 ntBASIC16.07■□□□□ 0.16
DENND4CQ5VZ89 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
DENND4CQ5VZ89 PACS1-203ENST00000524815 628 ntTSL 4 BASIC16.07■□□□□ 0.16
DENND4CQ5VZ89 RPL8-205ENST00000527914 551 ntTSL 3 BASIC16.07■□□□□ 0.16
DENND4CQ5VZ89 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC16.07■□□□□ 0.16
DENND4CQ5VZ89 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC16.07■□□□□ 0.16
DENND4CQ5VZ89 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
DENND4CQ5VZ89 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DENND4CQ5VZ89 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
DENND4CQ5VZ89 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DENND4CQ5VZ89 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
DENND4CQ5VZ89 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.07■□□□□ 0.16
DENND4CQ5VZ89 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC16.07■□□□□ 0.16
DENND4CQ5VZ89 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.07■□□□□ 0.16
DENND4CQ5VZ89 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DENND4CQ5VZ89 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
DENND4CQ5VZ89 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
DENND4CQ5VZ89 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DENND4CQ5VZ89 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
DENND4CQ5VZ89 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.07■□□□□ 0.16
DENND4CQ5VZ89 AC078819.1-201ENST00000547454 765 ntBASIC16.07■□□□□ 0.16
DENND4CQ5VZ89 AC012085.1-201ENST00000548270 765 ntBASIC16.07■□□□□ 0.16
DENND4CQ5VZ89 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC16.07■□□□□ 0.16
DENND4CQ5VZ89 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
DENND4CQ5VZ89 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms