Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 TEX28P1-201ENST00000613479 1221 ntBASIC16.77■□□□□ 0.28
PTPN20Q4JDL3 TEX28P2-201ENST00000617764 1221 ntBASIC16.77■□□□□ 0.28
PTPN20Q4JDL3 AC073592.8-201ENST00000624126 511 ntBASIC16.77■□□□□ 0.28
PTPN20Q4JDL3 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN20Q4JDL3 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.77■□□□□ 0.27
PTPN20Q4JDL3 AC009090.5-201ENST00000624886 2285 ntBASIC16.77■□□□□ 0.27
PTPN20Q4JDL3 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
PTPN20Q4JDL3 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.77■□□□□ 0.27
PTPN20Q4JDL3 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PTPN20Q4JDL3 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
PTPN20Q4JDL3 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
PTPN20Q4JDL3 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PTPN20Q4JDL3 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.77■□□□□ 0.27
PTPN20Q4JDL3 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PTPN20Q4JDL3 AL607033.1-201ENST00000623900 1599 ntBASIC16.77■□□□□ 0.27
PTPN20Q4JDL3 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN20Q4JDL3 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
PTPN20Q4JDL3 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN20Q4JDL3 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN20Q4JDL3 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN20Q4JDL3 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.76■□□□□ 0.27
PTPN20Q4JDL3 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
PTPN20Q4JDL3 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN20Q4JDL3 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
PTPN20Q4JDL3 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.76■□□□□ 0.27
PTPN20Q4JDL3 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN20Q4JDL3 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN20Q4JDL3 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN20Q4JDL3 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN20Q4JDL3 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.76■□□□□ 0.27
PTPN20Q4JDL3 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN20Q4JDL3 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN20Q4JDL3 AC092580.3-201ENST00000430932 139 ntBASIC16.76■□□□□ 0.27
PTPN20Q4JDL3 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.76■□□□□ 0.27
PTPN20Q4JDL3 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.76■□□□□ 0.27
PTPN20Q4JDL3 AC092183.1-201ENST00000469884 875 ntBASIC16.76■□□□□ 0.27
PTPN20Q4JDL3 AC067863.1-201ENST00000494933 530 ntBASIC16.76■□□□□ 0.27
PTPN20Q4JDL3 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.76■□□□□ 0.27
PTPN20Q4JDL3 AC069120.2-201ENST00000524091 540 ntBASIC16.76■□□□□ 0.27
PTPN20Q4JDL3 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.76■□□□□ 0.27
PTPN20Q4JDL3 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.76■□□□□ 0.27
PTPN20Q4JDL3 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.76■□□□□ 0.27
PTPN20Q4JDL3 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
PTPN20Q4JDL3 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.76■□□□□ 0.27
PTPN20Q4JDL3 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN20Q4JDL3 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN20Q4JDL3 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN20Q4JDL3 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN20Q4JDL3 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN20Q4JDL3 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.76■□□□□ 0.27
PTPN20Q4JDL3 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.76■□□□□ 0.27
PTPN20Q4JDL3 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN20Q4JDL3 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.76■□□□□ 0.27
PTPN20Q4JDL3 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN20Q4JDL3 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN20Q4JDL3 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.75■□□□□ 0.27
PTPN20Q4JDL3 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN20Q4JDL3 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN20Q4JDL3 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
PTPN20Q4JDL3 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.75■□□□□ 0.27
PTPN20Q4JDL3 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.75■□□□□ 0.27
PTPN20Q4JDL3 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN20Q4JDL3 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN20Q4JDL3 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN20Q4JDL3 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN20Q4JDL3 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN20Q4JDL3 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.75■□□□□ 0.27
PTPN20Q4JDL3 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN20Q4JDL3 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
PTPN20Q4JDL3 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN20Q4JDL3 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN20Q4JDL3 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN20Q4JDL3 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN20Q4JDL3 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
PTPN20Q4JDL3 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN20Q4JDL3 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
PTPN20Q4JDL3 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.75■□□□□ 0.27
PTPN20Q4JDL3 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN20Q4JDL3 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN20Q4JDL3 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.75■□□□□ 0.27
PTPN20Q4JDL3 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN20Q4JDL3 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.75■□□□□ 0.27
PTPN20Q4JDL3 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
PTPN20Q4JDL3 AL512361.1-201ENST00000554200 418 ntBASIC16.75■□□□□ 0.27
PTPN20Q4JDL3 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN20Q4JDL3 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN20Q4JDL3 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN20Q4JDL3 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
PTPN20Q4JDL3 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN20Q4JDL3 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
PTPN20Q4JDL3 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN20Q4JDL3 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.75■□□□□ 0.27
PTPN20Q4JDL3 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.75■□□□□ 0.27
PTPN20Q4JDL3 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
PTPN20Q4JDL3 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.75■□□□□ 0.27
PTPN20Q4JDL3 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN20Q4JDL3 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.74■□□□□ 0.27
PTPN20Q4JDL3 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN20Q4JDL3 AC105250.1-201ENST00000509378 2057 ntBASIC16.74■□□□□ 0.27
PTPN20Q4JDL3 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms