Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
SCN7AQ01118 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC19.44■□□□□ 0.7
SCN7AQ01118 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCN7AQ01118 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SCN7AQ01118 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SCN7AQ01118 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCN7AQ01118 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCN7AQ01118 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCN7AQ01118 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC19.44■□□□□ 0.7
SCN7AQ01118 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
SCN7AQ01118 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SCN7AQ01118 CD8B2-202ENST00000417670 633 ntBASIC19.44■□□□□ 0.7
SCN7AQ01118 AL354877.1-201ENST00000424412 413 ntBASIC19.44■□□□□ 0.7
SCN7AQ01118 BX284668.4-201ENST00000453917 508 ntBASIC19.44■□□□□ 0.7
SCN7AQ01118 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC19.44■□□□□ 0.7
SCN7AQ01118 TSACC-208ENST00000481479 741 ntTSL 2 BASIC19.44■□□□□ 0.7
SCN7AQ01118 PPY2P-201ENST00000582808 702 ntBASIC19.44■□□□□ 0.7
SCN7AQ01118 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SCN7AQ01118 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC19.44■□□□□ 0.7
SCN7AQ01118 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SCN7AQ01118 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCN7AQ01118 AL451050.2-201ENST00000606967 682 ntBASIC19.44■□□□□ 0.7
SCN7AQ01118 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SCN7AQ01118 ENPP7P14-201ENST00000621765 1040 ntBASIC19.44■□□□□ 0.7
SCN7AQ01118 AC132938.4-201ENST00000623835 848 ntBASIC19.44■□□□□ 0.7
SCN7AQ01118 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC19.44■□□□□ 0.7
SCN7AQ01118 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SCN7AQ01118 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC19.44■□□□□ 0.7
SCN7AQ01118 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC19.44■□□□□ 0.7
SCN7AQ01118 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SCN7AQ01118 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCN7AQ01118 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SCN7AQ01118 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCN7AQ01118 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC19.44■□□□□ 0.7
SCN7AQ01118 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCN7AQ01118 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SCN7AQ01118 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCN7AQ01118 SDCCAG3P2-201ENST00000326105 1023 ntBASIC19.43■□□□□ 0.7
SCN7AQ01118 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC19.43■□□□□ 0.7
SCN7AQ01118 POM121L10P-201ENST00000436994 1285 ntBASIC19.43■□□□□ 0.7
SCN7AQ01118 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SCN7AQ01118 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC19.43■□□□□ 0.7
SCN7AQ01118 NCK2-206ENST00000522586 490 ntTSL 5 BASIC19.43■□□□□ 0.7
SCN7AQ01118 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCN7AQ01118 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC19.43■□□□□ 0.7
SCN7AQ01118 AC138649.2-201ENST00000615886 705 ntBASIC19.43■□□□□ 0.7
SCN7AQ01118 AL645728.2-202ENST00000641679 227 ntBASIC19.43■□□□□ 0.7
SCN7AQ01118 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCN7AQ01118 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.43■□□□□ 0.7
SCN7AQ01118 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC19.43■□□□□ 0.7
SCN7AQ01118 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SCN7AQ01118 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCN7AQ01118 LRRC59-203ENST00000576448 1531 ntBASIC19.43■□□□□ 0.7
SCN7AQ01118 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
SCN7AQ01118 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SCN7AQ01118 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SCN7AQ01118 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCN7AQ01118 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.43■□□□□ 0.7
SCN7AQ01118 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCN7AQ01118 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCN7AQ01118 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.43■□□□□ 0.7
SCN7AQ01118 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC19.43■□□□□ 0.7
SCN7AQ01118 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC19.43■□□□□ 0.7
SCN7AQ01118 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC19.43■□□□□ 0.7
SCN7AQ01118 AL391280.1-201ENST00000506969 1062 ntBASIC19.43■□□□□ 0.7
SCN7AQ01118 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC19.43■□□□□ 0.7
SCN7AQ01118 AC091812.3-201ENST00000621362 345 ntBASIC19.43■□□□□ 0.7
SCN7AQ01118 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC19.43■□□□□ 0.7
SCN7AQ01118 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SCN7AQ01118 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SCN7AQ01118 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SCN7AQ01118 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC19.42■□□□□ 0.7
SCN7AQ01118 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
SCN7AQ01118 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCN7AQ01118 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC19.42■□□□□ 0.7
SCN7AQ01118 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCN7AQ01118 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCN7AQ01118 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SCN7AQ01118 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCN7AQ01118 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC19.42■□□□□ 0.7
SCN7AQ01118 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCN7AQ01118 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC19.42■□□□□ 0.7
SCN7AQ01118 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCN7AQ01118 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCN7AQ01118 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCN7AQ01118 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SCN7AQ01118 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC19.42■□□□□ 0.7
SCN7AQ01118 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SCN7AQ01118 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC19.42■□□□□ 0.7
SCN7AQ01118 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC19.42■□□□□ 0.7
SCN7AQ01118 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
SCN7AQ01118 COG4-212ENST00000564653 590 ntTSL 5 BASIC19.42■□□□□ 0.7
SCN7AQ01118 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC19.42■□□□□ 0.7
SCN7AQ01118 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC19.42■□□□□ 0.7
SCN7AQ01118 NDUFV2P1-201ENST00000596415 907 ntBASIC19.42■□□□□ 0.7
SCN7AQ01118 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC19.42■□□□□ 0.7
SCN7AQ01118 AC138627.1-207ENST00000641560 1006 ntBASIC19.42■□□□□ 0.7
SCN7AQ01118 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SCN7AQ01118 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCN7AQ01118 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms