Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SEC61A1P61619 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
SEC61A1P61619 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
SEC61A1P61619 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.08□□□□□ -0.16
SEC61A1P61619 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SEC61A1P61619 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
SEC61A1P61619 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SEC61A1P61619 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.08□□□□□ -0.16
SEC61A1P61619 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.08□□□□□ -0.16
SEC61A1P61619 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
SEC61A1P61619 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SEC61A1P61619 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SEC61A1P61619 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SEC61A1P61619 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.07□□□□□ -0.16
SEC61A1P61619 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SEC61A1P61619 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SEC61A1P61619 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SEC61A1P61619 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
SEC61A1P61619 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SEC61A1P61619 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.07□□□□□ -0.16
SEC61A1P61619 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SEC61A1P61619 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
SEC61A1P61619 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
SEC61A1P61619 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.07□□□□□ -0.16
SEC61A1P61619 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.07□□□□□ -0.16
SEC61A1P61619 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SEC61A1P61619 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.07□□□□□ -0.16
SEC61A1P61619 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SEC61A1P61619 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
SEC61A1P61619 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.07□□□□□ -0.16
SEC61A1P61619 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.07□□□□□ -0.16
SEC61A1P61619 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SEC61A1P61619 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.07□□□□□ -0.16
SEC61A1P61619 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SEC61A1P61619 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SEC61A1P61619 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.07□□□□□ -0.16
SEC61A1P61619 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.07□□□□□ -0.16
SEC61A1P61619 DNAJB3-202ENST00000449667 1266 ntBASIC14.07□□□□□ -0.16
SEC61A1P61619 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SEC61A1P61619 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SEC61A1P61619 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
SEC61A1P61619 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SEC61A1P61619 AL031432.2-201ENST00000566714 459 ntBASIC14.07□□□□□ -0.16
SEC61A1P61619 AL928711.1-201ENST00000570165 459 ntBASIC14.07□□□□□ -0.16
SEC61A1P61619 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
SEC61A1P61619 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SEC61A1P61619 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
SEC61A1P61619 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SEC61A1P61619 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SEC61A1P61619 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SEC61A1P61619 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SEC61A1P61619 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.07□□□□□ -0.16
SEC61A1P61619 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.07□□□□□ -0.16
SEC61A1P61619 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SEC61A1P61619 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SEC61A1P61619 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SEC61A1P61619 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SEC61A1P61619 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SEC61A1P61619 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SEC61A1P61619 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SEC61A1P61619 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SEC61A1P61619 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SEC61A1P61619 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.06□□□□□ -0.16
SEC61A1P61619 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SEC61A1P61619 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SEC61A1P61619 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.06□□□□□ -0.16
SEC61A1P61619 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SEC61A1P61619 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SEC61A1P61619 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SEC61A1P61619 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SEC61A1P61619 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SEC61A1P61619 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SEC61A1P61619 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SEC61A1P61619 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SEC61A1P61619 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SEC61A1P61619 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SEC61A1P61619 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SEC61A1P61619 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
SEC61A1P61619 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SEC61A1P61619 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SEC61A1P61619 AC092183.1-201ENST00000469884 875 ntBASIC14.06□□□□□ -0.16
SEC61A1P61619 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.06□□□□□ -0.16
SEC61A1P61619 YBX1P5-201ENST00000509441 847 ntBASIC14.06□□□□□ -0.16
SEC61A1P61619 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.06□□□□□ -0.16
SEC61A1P61619 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.06□□□□□ -0.16
SEC61A1P61619 AP001160.2-201ENST00000596071 487 ntBASIC14.06□□□□□ -0.16
SEC61A1P61619 AC013467.2-201ENST00000605472 835 ntBASIC14.06□□□□□ -0.16
SEC61A1P61619 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.06□□□□□ -0.16
SEC61A1P61619 AL596442.2-201ENST00000610240 980 ntBASIC14.06□□□□□ -0.16
SEC61A1P61619 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SEC61A1P61619 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SEC61A1P61619 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SEC61A1P61619 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.06□□□□□ -0.16
SEC61A1P61619 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SEC61A1P61619 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SEC61A1P61619 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SEC61A1P61619 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SEC61A1P61619 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SEC61A1P61619 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
SEC61A1P61619 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms