Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.71■□□□□ 0.1
CLDN2P57739 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CLDN2P57739 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CLDN2P57739 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.71■□□□□ 0.1
CLDN2P57739 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.71■□□□□ 0.1
CLDN2P57739 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.71■□□□□ 0.1
CLDN2P57739 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN2P57739 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.7■□□□□ 0.1
CLDN2P57739 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN2P57739 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.7■□□□□ 0.1
CLDN2P57739 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN2P57739 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN2P57739 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN2P57739 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN2P57739 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN2P57739 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
CLDN2P57739 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN2P57739 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CLDN2P57739 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN2P57739 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.7■□□□□ 0.1
CLDN2P57739 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.7■□□□□ 0.1
CLDN2P57739 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN2P57739 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.7■□□□□ 0.1
CLDN2P57739 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN2P57739 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.7■□□□□ 0.1
CLDN2P57739 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.7■□□□□ 0.1
CLDN2P57739 AC036164.1-201ENST00000570544 333 ntBASIC15.7■□□□□ 0.1
CLDN2P57739 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.7■□□□□ 0.1
CLDN2P57739 AL450472.2-201ENST00000603663 1156 ntBASIC15.7■□□□□ 0.1
CLDN2P57739 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.7■□□□□ 0.1
CLDN2P57739 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.7■□□□□ 0.1
CLDN2P57739 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CLDN2P57739 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN2P57739 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.7■□□□□ 0.1
CLDN2P57739 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CLDN2P57739 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN2P57739 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CLDN2P57739 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN2P57739 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN2P57739 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN2P57739 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN2P57739 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN2P57739 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CLDN2P57739 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN2P57739 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CLDN2P57739 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN2P57739 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN2P57739 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CLDN2P57739 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CLDN2P57739 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN2P57739 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN2P57739 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN2P57739 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CLDN2P57739 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
CLDN2P57739 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN2P57739 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN2P57739 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN2P57739 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN2P57739 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN2P57739 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.69■□□□□ 0.1
CLDN2P57739 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN2P57739 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN2P57739 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CLDN2P57739 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN2P57739 AC079776.1-201ENST00000401540 1152 ntBASIC15.69■□□□□ 0.1
CLDN2P57739 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.69■□□□□ 0.1
CLDN2P57739 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC15.69■□□□□ 0.1
CLDN2P57739 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.69■□□□□ 0.1
CLDN2P57739 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.69■□□□□ 0.1
CLDN2P57739 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.69■□□□□ 0.1
CLDN2P57739 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.69■□□□□ 0.1
CLDN2P57739 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.69■□□□□ 0.1
CLDN2P57739 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.69■□□□□ 0.1
CLDN2P57739 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.69■□□□□ 0.1
CLDN2P57739 KRT17P8-201ENST00000540749 863 ntBASIC15.69■□□□□ 0.1
CLDN2P57739 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.69■□□□□ 0.1
CLDN2P57739 HNRNPUP1-201ENST00000554987 333 ntBASIC15.69■□□□□ 0.1
CLDN2P57739 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.69■□□□□ 0.1
CLDN2P57739 AL162274.1-201ENST00000617191 1098 ntBASIC15.69■□□□□ 0.1
CLDN2P57739 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CLDN2P57739 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN2P57739 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.69■□□□□ 0.1
CLDN2P57739 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN2P57739 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CLDN2P57739 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.69■□□□□ 0.1
CLDN2P57739 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN2P57739 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.69■□□□□ 0.1
CLDN2P57739 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.69■□□□□ 0.1
CLDN2P57739 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.69■□□□□ 0.1
CLDN2P57739 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN2P57739 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CLDN2P57739 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.68■□□□□ 0.1
CLDN2P57739 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CLDN2P57739 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN2P57739 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CLDN2P57739 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.68■□□□□ 0.1
CLDN2P57739 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN2P57739 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN2P57739 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
CLDN2P57739 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms