Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.87■□□□□ 0.29
RFC1P35251 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.87■□□□□ 0.29
RFC1P35251 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFC1P35251 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
RFC1P35251 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.87■□□□□ 0.29
RFC1P35251 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.87■□□□□ 0.29
RFC1P35251 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.87■□□□□ 0.29
RFC1P35251 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.87■□□□□ 0.29
RFC1P35251 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.87■□□□□ 0.29
RFC1P35251 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.87■□□□□ 0.29
RFC1P35251 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RFC1P35251 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.87■□□□□ 0.29
RFC1P35251 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RFC1P35251 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
RFC1P35251 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFC1P35251 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
RFC1P35251 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFC1P35251 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFC1P35251 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.87■□□□□ 0.29
RFC1P35251 AC018892.3-201ENST00000623986 2499 ntBASIC16.87■□□□□ 0.29
RFC1P35251 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFC1P35251 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RFC1P35251 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.86■□□□□ 0.29
RFC1P35251 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.86■□□□□ 0.29
RFC1P35251 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
RFC1P35251 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.86■□□□□ 0.29
RFC1P35251 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.86■□□□□ 0.29
RFC1P35251 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.86■□□□□ 0.29
RFC1P35251 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
RFC1P35251 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFC1P35251 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFC1P35251 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RFC1P35251 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.86■□□□□ 0.29
RFC1P35251 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFC1P35251 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.86■□□□□ 0.29
RFC1P35251 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.86■□□□□ 0.29
RFC1P35251 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RFC1P35251 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
RFC1P35251 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.86■□□□□ 0.29
RFC1P35251 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.86■□□□□ 0.29
RFC1P35251 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
RFC1P35251 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.86■□□□□ 0.29
RFC1P35251 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.86■□□□□ 0.29
RFC1P35251 AC009093.7-201ENST00000623853 1223 ntBASIC16.86■□□□□ 0.29
RFC1P35251 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.86■□□□□ 0.29
RFC1P35251 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.86■□□□□ 0.29
RFC1P35251 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.86■□□□□ 0.29
RFC1P35251 MIR600HG-201ENST00000449175 5984 ntBASIC16.86■□□□□ 0.29
RFC1P35251 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFC1P35251 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
RFC1P35251 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RFC1P35251 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFC1P35251 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.86■□□□□ 0.29
RFC1P35251 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFC1P35251 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFC1P35251 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFC1P35251 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.86■□□□□ 0.29
RFC1P35251 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
RFC1P35251 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RFC1P35251 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
RFC1P35251 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFC1P35251 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFC1P35251 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFC1P35251 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RFC1P35251 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RFC1P35251 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFC1P35251 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFC1P35251 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.85■□□□□ 0.29
RFC1P35251 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RFC1P35251 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFC1P35251 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
RFC1P35251 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
RFC1P35251 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RFC1P35251 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFC1P35251 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFC1P35251 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFC1P35251 AC004987.2-201ENST00000395959 1148 ntBASIC16.85■□□□□ 0.29
RFC1P35251 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.85■□□□□ 0.29
RFC1P35251 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.85■□□□□ 0.29
RFC1P35251 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RFC1P35251 SPDYE14P-201ENST00000442619 822 ntBASIC16.85■□□□□ 0.29
RFC1P35251 AC004967.1-201ENST00000453589 447 ntBASIC16.85■□□□□ 0.29
RFC1P35251 AL139010.1-201ENST00000454878 894 ntBASIC16.85■□□□□ 0.29
RFC1P35251 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RFC1P35251 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.85■□□□□ 0.29
RFC1P35251 AC026150.2-201ENST00000564693 1156 ntBASIC16.85■□□□□ 0.29
RFC1P35251 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.85■□□□□ 0.29
RFC1P35251 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RFC1P35251 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RFC1P35251 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFC1P35251 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.85■□□□□ 0.29
RFC1P35251 AC018529.1-201ENST00000613063 361 ntBASIC16.85■□□□□ 0.29
RFC1P35251 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RFC1P35251 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFC1P35251 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RFC1P35251 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
RFC1P35251 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RFC1P35251 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
RFC1P35251 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
RFC1P35251 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms