Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC130P13994 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC130P13994 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC130P13994 AC011477.6-201ENST00000604980 1927 ntBASIC16.9■□□□□ 0.3
CCDC130P13994 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CCDC130P13994 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC130P13994 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC130P13994 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC130P13994 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC130P13994 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC130P13994 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CCDC130P13994 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CCDC130P13994 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC130P13994 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.9■□□□□ 0.3
CCDC130P13994 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.9■□□□□ 0.3
CCDC130P13994 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.9■□□□□ 0.3
CCDC130P13994 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC130P13994 SPDYE18-201ENST00000510091 1050 ntBASIC16.9■□□□□ 0.3
CCDC130P13994 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC130P13994 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC130P13994 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.9■□□□□ 0.3
CCDC130P13994 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC130P13994 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC130P13994 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC130P13994 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC130P13994 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC130P13994 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC130P13994 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC130P13994 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC130P13994 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC130P13994 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC130P13994 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC130P13994 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC130P13994 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC130P13994 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC130P13994 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC130P13994 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC130P13994 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC130P13994 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC130P13994 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CCDC130P13994 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC130P13994 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC130P13994 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
CCDC130P13994 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC130P13994 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.89■□□□□ 0.29
CCDC130P13994 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CCDC130P13994 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CCDC130P13994 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC130P13994 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC130P13994 AC236430.1-201ENST00000402231 743 ntBASIC16.89■□□□□ 0.29
CCDC130P13994 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC130P13994 PHKG1P2-201ENST00000457537 863 ntBASIC16.89■□□□□ 0.29
CCDC130P13994 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.89■□□□□ 0.29
CCDC130P13994 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC130P13994 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.89■□□□□ 0.29
CCDC130P13994 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC130P13994 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC130P13994 ZNF890P-202ENST00000530367 1156 ntBASIC16.89■□□□□ 0.29
CCDC130P13994 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.89■□□□□ 0.29
CCDC130P13994 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CCDC130P13994 AC092364.2-202ENST00000597012 1073 ntBASIC16.89■□□□□ 0.29
CCDC130P13994 AL450472.2-201ENST00000603663 1156 ntBASIC16.89■□□□□ 0.29
CCDC130P13994 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.89■□□□□ 0.29
CCDC130P13994 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CCDC130P13994 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC130P13994 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.89■□□□□ 0.29
CCDC130P13994 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC130P13994 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC130P13994 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC130P13994 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC130P13994 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.89■□□□□ 0.29
CCDC130P13994 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
CCDC130P13994 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.89■□□□□ 0.29
CCDC130P13994 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC130P13994 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC130P13994 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC130P13994 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC130P13994 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC130P13994 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CCDC130P13994 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.88■□□□□ 0.29
CCDC130P13994 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC130P13994 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC130P13994 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC130P13994 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC130P13994 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC130P13994 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.88■□□□□ 0.29
CCDC130P13994 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC130P13994 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC130P13994 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC130P13994 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC130P13994 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC130P13994 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC130P13994 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC130P13994 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC130P13994 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.88■□□□□ 0.29
CCDC130P13994 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CCDC130P13994 SERBP1P5-201ENST00000510079 1181 ntBASIC16.88■□□□□ 0.29
CCDC130P13994 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.88■□□□□ 0.29
CCDC130P13994 AC135586.1-201ENST00000539323 574 ntBASIC16.88■□□□□ 0.29
CCDC130P13994 HNRNPUP1-201ENST00000554987 333 ntBASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms