Protein–RNA interactions for Protein: Q8CDT7

Cabcoco1, Ciliary-associated calcium-binding coiled-coil protein 1, mousemouse

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cabcoco1Q8CDT7 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cabcoco1Q8CDT7 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cabcoco1Q8CDT7 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cabcoco1Q8CDT7 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Cabcoco1Q8CDT7 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cabcoco1Q8CDT7 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cabcoco1Q8CDT7 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cabcoco1Q8CDT7 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cabcoco1Q8CDT7 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cabcoco1Q8CDT7 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.7■□□□□ 0.9
Cabcoco1Q8CDT7 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cabcoco1Q8CDT7 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cabcoco1Q8CDT7 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cabcoco1Q8CDT7 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cabcoco1Q8CDT7 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Cabcoco1Q8CDT7 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cabcoco1Q8CDT7 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cabcoco1Q8CDT7 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Cabcoco1Q8CDT7 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cabcoco1Q8CDT7 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Cabcoco1Q8CDT7 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cabcoco1Q8CDT7 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Cabcoco1Q8CDT7 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cabcoco1Q8CDT7 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cabcoco1Q8CDT7 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cabcoco1Q8CDT7 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
Cabcoco1Q8CDT7 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Cabcoco1Q8CDT7 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Cabcoco1Q8CDT7 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cabcoco1Q8CDT7 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
Cabcoco1Q8CDT7 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Cabcoco1Q8CDT7 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cabcoco1Q8CDT7 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cabcoco1Q8CDT7 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cabcoco1Q8CDT7 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cabcoco1Q8CDT7 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.67■□□□□ 0.9
Cabcoco1Q8CDT7 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Cabcoco1Q8CDT7 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.66■□□□□ 0.9
Cabcoco1Q8CDT7 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cabcoco1Q8CDT7 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cabcoco1Q8CDT7 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cabcoco1Q8CDT7 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cabcoco1Q8CDT7 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cabcoco1Q8CDT7 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.65■□□□□ 0.9
Cabcoco1Q8CDT7 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cabcoco1Q8CDT7 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.65■□□□□ 0.9
Cabcoco1Q8CDT7 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cabcoco1Q8CDT7 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cabcoco1Q8CDT7 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cabcoco1Q8CDT7 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cabcoco1Q8CDT7 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Cabcoco1Q8CDT7 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cabcoco1Q8CDT7 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cabcoco1Q8CDT7 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.64■□□□□ 0.89
Cabcoco1Q8CDT7 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cabcoco1Q8CDT7 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Cabcoco1Q8CDT7 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Cabcoco1Q8CDT7 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.63■□□□□ 0.89
Cabcoco1Q8CDT7 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cabcoco1Q8CDT7 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cabcoco1Q8CDT7 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
Cabcoco1Q8CDT7 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cabcoco1Q8CDT7 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cabcoco1Q8CDT7 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cabcoco1Q8CDT7 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cabcoco1Q8CDT7 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.63■□□□□ 0.89
Cabcoco1Q8CDT7 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.63■□□□□ 0.89
Cabcoco1Q8CDT7 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cabcoco1Q8CDT7 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cabcoco1Q8CDT7 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cabcoco1Q8CDT7 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cabcoco1Q8CDT7 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cabcoco1Q8CDT7 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cabcoco1Q8CDT7 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.62■□□□□ 0.89
Cabcoco1Q8CDT7 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cabcoco1Q8CDT7 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cabcoco1Q8CDT7 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Cabcoco1Q8CDT7 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cabcoco1Q8CDT7 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cabcoco1Q8CDT7 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Cabcoco1Q8CDT7 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cabcoco1Q8CDT7 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cabcoco1Q8CDT7 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Cabcoco1Q8CDT7 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cabcoco1Q8CDT7 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cabcoco1Q8CDT7 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cabcoco1Q8CDT7 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cabcoco1Q8CDT7 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Cabcoco1Q8CDT7 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Cabcoco1Q8CDT7 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cabcoco1Q8CDT7 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.6■□□□□ 0.89
Cabcoco1Q8CDT7 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cabcoco1Q8CDT7 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cabcoco1Q8CDT7 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cabcoco1Q8CDT7 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Cabcoco1Q8CDT7 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cabcoco1Q8CDT7 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Cabcoco1Q8CDT7 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cabcoco1Q8CDT7 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cabcoco1Q8CDT7 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms