Protein–RNA interactions for Protein: Q8BGB5

Limd2, LIM domain-containing protein 2, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limd2Q8BGB5 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Limd2Q8BGB5 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Limd2Q8BGB5 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Limd2Q8BGB5 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Limd2Q8BGB5 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Limd2Q8BGB5 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
Limd2Q8BGB5 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Limd2Q8BGB5 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Limd2Q8BGB5 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Limd2Q8BGB5 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Limd2Q8BGB5 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC11.62□□□□□ -0.55
Limd2Q8BGB5 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Limd2Q8BGB5 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Limd2Q8BGB5 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC11.62□□□□□ -0.55
Limd2Q8BGB5 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC11.62□□□□□ -0.55
Limd2Q8BGB5 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Limd2Q8BGB5 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Limd2Q8BGB5 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Limd2Q8BGB5 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Limd2Q8BGB5 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Limd2Q8BGB5 Gm5112-201ENSMUST00000204407 2368 ntBASIC11.61□□□□□ -0.55
Limd2Q8BGB5 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Limd2Q8BGB5 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC11.61□□□□□ -0.55
Limd2Q8BGB5 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Limd2Q8BGB5 Gm27322-201ENSMUST00000184007 104 ntBASIC11.61□□□□□ -0.55
Limd2Q8BGB5 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Limd2Q8BGB5 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Limd2Q8BGB5 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Limd2Q8BGB5 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Limd2Q8BGB5 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Limd2Q8BGB5 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Limd2Q8BGB5 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Limd2Q8BGB5 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Limd2Q8BGB5 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Limd2Q8BGB5 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Limd2Q8BGB5 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Limd2Q8BGB5 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Limd2Q8BGB5 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Limd2Q8BGB5 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Limd2Q8BGB5 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Limd2Q8BGB5 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Limd2Q8BGB5 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Limd2Q8BGB5 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Limd2Q8BGB5 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Limd2Q8BGB5 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Limd2Q8BGB5 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
Limd2Q8BGB5 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Limd2Q8BGB5 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Limd2Q8BGB5 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Limd2Q8BGB5 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Limd2Q8BGB5 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Limd2Q8BGB5 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Limd2Q8BGB5 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Limd2Q8BGB5 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Limd2Q8BGB5 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Limd2Q8BGB5 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Limd2Q8BGB5 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Limd2Q8BGB5 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC11.59□□□□□ -0.55
Limd2Q8BGB5 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Limd2Q8BGB5 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Limd2Q8BGB5 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.55
Limd2Q8BGB5 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Limd2Q8BGB5 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Limd2Q8BGB5 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Limd2Q8BGB5 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Limd2Q8BGB5 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC11.58□□□□□ -0.56
Limd2Q8BGB5 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Limd2Q8BGB5 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Limd2Q8BGB5 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Limd2Q8BGB5 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Limd2Q8BGB5 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Limd2Q8BGB5 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC11.57□□□□□ -0.56
Limd2Q8BGB5 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Limd2Q8BGB5 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Limd2Q8BGB5 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Limd2Q8BGB5 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Limd2Q8BGB5 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Limd2Q8BGB5 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC11.57□□□□□ -0.56
Limd2Q8BGB5 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC11.57□□□□□ -0.56
Limd2Q8BGB5 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Limd2Q8BGB5 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Limd2Q8BGB5 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Limd2Q8BGB5 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Limd2Q8BGB5 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Limd2Q8BGB5 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Limd2Q8BGB5 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Limd2Q8BGB5 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Limd2Q8BGB5 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Limd2Q8BGB5 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
Limd2Q8BGB5 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Limd2Q8BGB5 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Limd2Q8BGB5 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Limd2Q8BGB5 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Limd2Q8BGB5 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Limd2Q8BGB5 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Limd2Q8BGB5 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Limd2Q8BGB5 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Limd2Q8BGB5 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Limd2Q8BGB5 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Limd2Q8BGB5 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms