Protein–RNA interactions for Protein: P53538

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, yeastyeast

Predicted RBP Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSU72P53538 YER186CYER186C 921 nt4.85□□□□□ -1.63
SSU72P53538 YHR213W-AYHR213W-A 234 nt4.85□□□□□ -1.63
SSU72P53538 FAF1YIL019W 1041 nt4.85□□□□□ -1.63
SSU72P53538 MDH1YKL085W 1005 nt4.85□□□□□ -1.63
SSU72P53538 YMR295CYMR295C 594 nt4.85□□□□□ -1.63
SSU72P53538 MEC3YLR288C 1425 nt4.85□□□□□ -1.63
SSU72P53538 ATG4YNL223W 1485 nt4.85□□□□□ -1.63
SSU72P53538 GAT1YFL021W 1533 nt4.85□□□□□ -1.63
SSU72P53538 YRF1-4YLR466W 4149 nt4.84□□□□□ -1.63
SSU72P53538 MSC7YHR039C 1935 nt4.84□□□□□ -1.63
SSU72P53538 APE1YKL103C 1545 nt4.84□□□□□ -1.63
SSU72P53538 KSS1YGR040W 1107 nt4.84□□□□□ -1.63
SSU72P53538 YJU3YKL094W 942 nt4.84□□□□□ -1.63
SSU72P53538 PRS1YKL181W 1284 nt4.84□□□□□ -1.63
SSU72P53538 OST3YOR085W 1053 nt4.84□□□□□ -1.63
SSU72P53538 MBP1YDL056W 2502 nt4.84□□□□□ -1.64
SSU72P53538 RAD3YER171W 2337 nt4.83□□□□□ -1.64
SSU72P53538 RNH201YNL072W 924 nt4.83□□□□□ -1.64
SSU72P53538 YNL285WYNL285W 372 nt4.83□□□□□ -1.64
SSU72P53538 YPK2YMR104C 2034 nt4.83□□□□□ -1.64
SSU72P53538 YTA12YMR089C 2478 nt4.83□□□□□ -1.64
SSU72P53538 HSP78YDR258C 2436 nt4.83□□□□□ -1.64
SSU72P53538 MCM3YEL032W 2916 nt4.83□□□□□ -1.64
SSU72P53538 FRE3YOR381W 2136 nt4.82□□□□□ -1.64
SSU72P53538 BPL1YDL141W 2073 nt4.82□□□□□ -1.64
SSU72P53538 CLB1YGR108W 1416 nt4.82□□□□□ -1.64
SSU72P53538 MSS116YDR194C 1995 nt4.82□□□□□ -1.64
SSU72P53538 VCX1YDL128W 1236 nt4.82□□□□□ -1.64
SSU72P53538 PMP3YDR276C 168 nt4.82□□□□□ -1.64
SSU72P53538 SUP19tS(UGA)E 82 nt4.82□□□□□ -1.64
SSU72P53538 SUP17tS(UGA)I 82 nt4.82□□□□□ -1.64
SSU72P53538 SUP16tS(UGA)P 82 nt4.82□□□□□ -1.64
SSU72P53538 COX11YPL132W 903 nt4.82□□□□□ -1.64
SSU72P53538 ATH1YPR026W 3636 nt4.82□□□□□ -1.64
SSU72P53538 RAD24YER173W 1980 nt4.82□□□□□ -1.64
SSU72P53538 GIP1YBR045C 1920 nt4.82□□□□□ -1.64
SSU72P53538 KRS1YDR037W 1776 nt4.81□□□□□ -1.64
SSU72P53538 YLH47YPR125W 1365 nt4.81□□□□□ -1.64
SSU72P53538 YER148W-AYER148W-A 579 nt4.81□□□□□ -1.64
SSU72P53538 LEU5YHR002W 1074 nt4.81□□□□□ -1.64
SSU72P53538 GIT1YCR098C 1557 nt4.81□□□□□ -1.64
SSU72P53538 ASF2YDL197C 1578 nt4.81□□□□□ -1.64
SSU72P53538 DSF1YEL070W 1509 nt4.81□□□□□ -1.64
SSU72P53538 YNR073CYNR073C 1509 nt4.81□□□□□ -1.64
SSU72P53538 MCM4YPR019W 2802 nt4.81□□□□□ -1.64
SSU72P53538 RPS2YGL123W 765 nt4.8□□□□□ -1.64
SSU72P53538 CAB4YGR277C 918 nt4.8□□□□□ -1.64
SSU72P53538 HLJ1YMR161W 675 nt4.8□□□□□ -1.64
SSU72P53538 FSF1YOR271C 984 nt4.8□□□□□ -1.64
SSU72P53538 YDR261C-DYDR261C-D 4815 nt4.8□□□□□ -1.64
SSU72P53538 SAP155YFR040W 3009 nt4.79□□□□□ -1.64
SSU72P53538 SKI6YGR195W 741 nt4.79□□□□□ -1.64
SSU72P53538 TAL1YLR354C 1008 nt4.79□□□□□ -1.64
SSU72P53538 SFI1YLL003W 2841 nt4.79□□□□□ -1.64
SSU72P53538 SEG2YKL105C 3399 nt4.79□□□□□ -1.64
SSU72P53538 IDP1YDL066W 1287 nt4.78□□□□□ -1.64
SSU72P53538 RSM10YDR041W 612 nt4.78□□□□□ -1.64
SSU72P53538 YFR035CYFR035C 345 nt4.78□□□□□ -1.64
SSU72P53538 RME1YGR044C 903 nt4.78□□□□□ -1.64
SSU72P53538 RPS5YJR123W 678 nt4.78□□□□□ -1.64
SSU72P53538 SRY1YKL218C 981 nt4.78□□□□□ -1.64
SSU72P53538 YNL042W-BYNL042W-B 258 nt4.78□□□□□ -1.64
SSU72P53538 YOL131WYOL131W 327 nt4.78□□□□□ -1.64
SSU72P53538 UTP18YJL069C 1785 nt4.78□□□□□ -1.64
SSU72P53538 STP4YDL048C 1473 nt4.77□□□□□ -1.65
SSU72P53538 CHO1YER026C 831 nt4.77□□□□□ -1.65
SSU72P53538 YLR157W-EYLR157W-E 165 nt4.77□□□□□ -1.65
SSU72P53538 CIN4YMR138W 576 nt4.77□□□□□ -1.65
SSU72P53538 JNM1YMR294W 1122 nt4.77□□□□□ -1.65
SSU72P53538 DIA3YDL024C 1407 nt4.77□□□□□ -1.65
SSU72P53538 PRI2YKL045W 1587 nt4.77□□□□□ -1.65
SSU72P53538 ATP1YBL099W 1638 nt4.76□□□□□ -1.65
SSU72P53538 YEL075W-AYEL075W-A 612 nt4.76□□□□□ -1.65
SSU72P53538 PRP43YGL120C 2304 nt4.76□□□□□ -1.65
SSU72P53538 LYS12YIL094C 1116 nt4.76□□□□□ -1.65
SSU72P53538 POR2YIL114C 846 nt4.76□□□□□ -1.65
SSU72P53538 DJP1YIR004W 1299 nt4.76□□□□□ -1.65
SSU72P53538 QRI5YLR204W 336 nt4.76□□□□□ -1.65
SSU72P53538 YLR463CYLR463C 552 nt4.76□□□□□ -1.65
SSU72P53538 URA7YBL039C 1740 nt4.76□□□□□ -1.65
SSU72P53538 YPR160C-AYPR160C-A 285 nt4.76□□□□□ -1.65
SSU72P53538 YJR124CYJR124C 1347 nt4.75□□□□□ -1.65
SSU72P53538 YDL057WYDL057W 987 nt4.75□□□□□ -1.65
SSU72P53538 ZRT1YGL255W 1131 nt4.75□□□□□ -1.65
SSU72P53538 YGR122WYGR122W 1209 nt4.75□□□□□ -1.65
SSU72P53538 YHL018WYHL018W 363 nt4.75□□□□□ -1.65
SSU72P53538 GCV3YAL044C 513 nt4.75□□□□□ -1.65
SSU72P53538 YML018CYML018C 1182 nt4.75□□□□□ -1.65
SSU72P53538 NOC4YPR144C 1659 nt4.75□□□□□ -1.65
SSU72P53538 NGR1YBR212W 2019 nt4.75□□□□□ -1.65
SSU72P53538 ASK10YGR097W 3441 nt4.75□□□□□ -1.65
SSU72P53538 ZUO1YGR285C 1302 nt4.74□□□□□ -1.65
SSU72P53538 SKS1YPL026C 1509 nt4.74□□□□□ -1.65
SSU72P53538 SNZ2YNL333W 897 nt4.74□□□□□ -1.65
SSU72P53538 MRPS5YBR251W 924 nt4.74□□□□□ -1.65
SSU72P53538 FZO1YBR179C 2568 nt4.74□□□□□ -1.65
SSU72P53538 GUA1YMR217W 1578 nt4.74□□□□□ -1.65
SSU72P53538 SIA1YOR137C 1869 nt4.73□□□□□ -1.65
SSU72P53538 YEH1YLL012W 1722 nt4.73□□□□□ -1.65
SSU72P53538 PHB1YGR132C 864 nt4.73□□□□□ -1.65
Retrieved 100 of 7,029 protein–RNA pairs in 12.6 ms