Protein–RNA interactions for Protein: P47821

SSN8, RNA polymerase II holoenzyme cyclin-like subunit, yeastyeast

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSN8P47821 YNL194CYNL194C 906 nt5.2□□□□□ -1.58
SSN8P47821 HST3YOR025W 1344 nt5.2□□□□□ -1.58
SSN8P47821 RRP9YPR137W 1722 nt5.2□□□□□ -1.58
SSN8P47821 ACC1YNR016C 6702 nt5.19□□□□□ -1.58
SSN8P47821 ATH1YPR026W 3636 nt5.19□□□□□ -1.58
SSN8P47821 CDC34YDR054C 888 nt5.19□□□□□ -1.58
SSN8P47821 YEL068CYEL068C 333 nt5.19□□□□□ -1.58
SSN8P47821 HVG1YER039C 750 nt5.19□□□□□ -1.58
SSN8P47821 YER084WYER084W 387 nt5.19□□□□□ -1.58
SSN8P47821 POR2YIL114C 846 nt5.19□□□□□ -1.58
SSN8P47821 RSA3YLR221C 663 nt5.19□□□□□ -1.58
SSN8P47821 MRPS16YPL013C 366 nt5.19□□□□□ -1.58
SSN8P47821 SNF3YDL194W 2655 nt5.19□□□□□ -1.58
SSN8P47821 GPR1YDL035C 2886 nt5.18□□□□□ -1.58
SSN8P47821 KKQ8YKL168C 2175 nt5.18□□□□□ -1.58
SSN8P47821 YDR015CYDR015C 240 nt5.18□□□□□ -1.58
SSN8P47821 YMR295CYMR295C 594 nt5.18□□□□□ -1.58
SSN8P47821 HAL1YPR005C 885 nt5.18□□□□□ -1.58
SSN8P47821 APM1YPL259C 1428 nt5.17□□□□□ -1.58
SSN8P47821 SEC9YGR009C 1956 nt5.17□□□□□ -1.58
SSN8P47821 RPN11YFR004W 921 nt5.17□□□□□ -1.58
SSN8P47821 MRPL24YMR193W 777 nt5.17□□□□□ -1.58
SSN8P47821 CAF40YNL288W 1122 nt5.17□□□□□ -1.58
SSN8P47821 YPR150WYPR150W 522 nt5.17□□□□□ -1.58
SSN8P47821 NSI1YDR026C 1713 nt5.17□□□□□ -1.58
SSN8P47821 YIL092WYIL092W 1902 nt5.17□□□□□ -1.58
SSN8P47821 PRP43YGL120C 2304 nt5.17□□□□□ -1.58
SSN8P47821 VNX1YNL321W 2727 nt5.16□□□□□ -1.58
SSN8P47821 YDR034W-BYDR034W-B 156 nt5.16□□□□□ -1.58
SSN8P47821 SNF11YDR073W 510 nt5.16□□□□□ -1.58
SSN8P47821 YEL077CYEL077C 3834 nt5.16□□□□□ -1.58
SSN8P47821 tR(ACG)DtR(ACG)D 73 nt5.16□□□□□ -1.58
SSN8P47821 tR(ACG)EtR(ACG)E 73 nt5.16□□□□□ -1.58
SSN8P47821 tR(ACG)KtR(ACG)K 73 nt5.16□□□□□ -1.58
SSN8P47821 tR(ACG)LtR(ACG)L 73 nt5.16□□□□□ -1.58
SSN8P47821 tR(ACG)OtR(ACG)O 73 nt5.16□□□□□ -1.58
SSN8P47821 MRS3YJL133W 945 nt5.16□□□□□ -1.58
SSN8P47821 SRY1YKL218C 981 nt5.16□□□□□ -1.58
SSN8P47821 ECM2YBR065C 1095 nt5.16□□□□□ -1.58
SSN8P47821 YPR114WYPR114W 948 nt5.16□□□□□ -1.58
SSN8P47821 MDM31YHR194W 1740 nt5.16□□□□□ -1.58
SSN8P47821 ATG18YFR021W 1503 nt5.16□□□□□ -1.58
SSN8P47821 MET7YOR241W 1647 nt5.15□□□□□ -1.58
SSN8P47821 MKC7YDR144C 1791 nt5.15□□□□□ -1.58
SSN8P47821 GAT1YFL021W 1533 nt5.15□□□□□ -1.58
SSN8P47821 FRS2YFL022C 1512 nt5.15□□□□□ -1.58
SSN8P47821 RPT6YGL048C 1218 nt5.15□□□□□ -1.59
SSN8P47821 YHR213W-AYHR213W-A 234 nt5.15□□□□□ -1.59
SSN8P47821 SUP2tY(GUA)D 75 nt5.15□□□□□ -1.59
SSN8P47821 SUP11tY(GUA)F1 75 nt5.15□□□□□ -1.59
SSN8P47821 SUP6tY(GUA)F2 75 nt5.15□□□□□ -1.59
SSN8P47821 SUP7tY(GUA)J1 75 nt5.15□□□□□ -1.59
SSN8P47821 SUP4tY(GUA)J2 75 nt5.15□□□□□ -1.59
SSN8P47821 SUP5tY(GUA)M1 75 nt5.15□□□□□ -1.59
SSN8P47821 SUP8tY(GUA)M2 75 nt5.15□□□□□ -1.59
SSN8P47821 SUP3tY(GUA)O 75 nt5.15□□□□□ -1.59
SSN8P47821 TAL1YLR354C 1008 nt5.15□□□□□ -1.59
SSN8P47821 CWC25YNL245C 540 nt5.15□□□□□ -1.59
SSN8P47821 YNL285WYNL285W 372 nt5.15□□□□□ -1.59
SSN8P47821 YBR126W-AYBR126W-A 207 nt5.15□□□□□ -1.59
SSN8P47821 ICL1YER065C 1674 nt5.15□□□□□ -1.59
SSN8P47821 DSF1YEL070W 1509 nt5.14□□□□□ -1.59
SSN8P47821 YNR073CYNR073C 1509 nt5.14□□□□□ -1.59
SSN8P47821 YDL218WYDL218W 954 nt5.14□□□□□ -1.59
SSN8P47821 YHL018WYHL018W 363 nt5.14□□□□□ -1.59
SSN8P47821 YNR040WYNR040W 771 nt5.14□□□□□ -1.59
SSN8P47821 FSF1YOR271C 984 nt5.14□□□□□ -1.59
SSN8P47821 GLE1YDL207W 1617 nt5.14□□□□□ -1.59
SSN8P47821 DAL81YIR023W 2913 nt5.13□□□□□ -1.59
SSN8P47821 KCH1YJR054W 1494 nt5.13□□□□□ -1.59
SSN8P47821 EAF5YEL018W 840 nt5.13□□□□□ -1.59
SSN8P47821 YEL075W-AYEL075W-A 612 nt5.13□□□□□ -1.59
SSN8P47821 YLR463CYLR463C 552 nt5.13□□□□□ -1.59
SSN8P47821 YML018CYML018C 1182 nt5.13□□□□□ -1.59
SSN8P47821 HAP3YBL021C 435 nt5.13□□□□□ -1.59
SSN8P47821 HMT1YBR034C 1047 nt5.13□□□□□ -1.59
SSN8P47821 SMF2YHR050W 1650 nt5.12□□□□□ -1.59
SSN8P47821 BAP2YBR068C 1830 nt5.12□□□□□ -1.59
SSN8P47821 HLJ1YMR161W 675 nt5.12□□□□□ -1.59
SSN8P47821 PFA3YNL326C 1011 nt5.12□□□□□ -1.59
SSN8P47821 RDL1YOR285W 420 nt5.12□□□□□ -1.59
SSN8P47821 RPN7YPR108W 1290 nt5.12□□□□□ -1.59
SSN8P47821 MCM3YEL032W 2916 nt5.11□□□□□ -1.59
SSN8P47821 ADK2YER170W 678 nt5.11□□□□□ -1.59
SSN8P47821 JNM1YMR294W 1122 nt5.11□□□□□ -1.59
SSN8P47821 RNH201YNL072W 924 nt5.11□□□□□ -1.59
SSN8P47821 ELC1YPL046C 300 nt5.11□□□□□ -1.59
SSN8P47821 PXA1YPL147W 2613 nt5.11□□□□□ -1.59
SSN8P47821 RPN5YDL147W 1338 nt5.11□□□□□ -1.59
SSN8P47821 ATG4YNL223W 1485 nt5.11□□□□□ -1.59
SSN8P47821 RCK1YGL158W 1539 nt5.11□□□□□ -1.59
SSN8P47821 YER187WYER187W 426 nt5.1□□□□□ -1.59
SSN8P47821 ALG5YPL227C 1005 nt5.1□□□□□ -1.59
SSN8P47821 PEX32YBR168W 1242 nt5.1□□□□□ -1.59
SSN8P47821 UBP9YER098W 2265 nt5.09□□□□□ -1.59
SSN8P47821 MSC7YHR039C 1935 nt5.09□□□□□ -1.59
SSN8P47821 ENT2YLR206W 1842 nt5.09□□□□□ -1.59
SSN8P47821 CPS1YJL172W 1731 nt5.09□□□□□ -1.59
SSN8P47821 YGR125WYGR125W 3111 nt5.09□□□□□ -1.59
SSN8P47821 PEX7YDR142C 1128 nt5.09□□□□□ -1.59
Retrieved 100 of 7,029 protein–RNA pairs in 13.5 ms