Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav16nA0A075B634 Gm45364-201ENSMUST00000210883 159 ntBASIC15.95■□□□□ 0.14
Trav16nA0A075B634 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
Trav16nA0A075B634 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav16nA0A075B634 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav16nA0A075B634 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav16nA0A075B634 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Trav16nA0A075B634 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Trav16nA0A075B634 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav16nA0A075B634 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav16nA0A075B634 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav16nA0A075B634 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC15.94■□□□□ 0.14
Trav16nA0A075B634 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav16nA0A075B634 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav16nA0A075B634 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav16nA0A075B634 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav16nA0A075B634 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
Trav16nA0A075B634 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
Trav16nA0A075B634 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav16nA0A075B634 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Trav16nA0A075B634 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav16nA0A075B634 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav16nA0A075B634 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav16nA0A075B634 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav16nA0A075B634 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav16nA0A075B634 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav16nA0A075B634 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav16nA0A075B634 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav16nA0A075B634 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav16nA0A075B634 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
Trav16nA0A075B634 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav16nA0A075B634 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav16nA0A075B634 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav16nA0A075B634 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav16nA0A075B634 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Trav16nA0A075B634 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav16nA0A075B634 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav16nA0A075B634 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav16nA0A075B634 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC15.91■□□□□ 0.14
Trav16nA0A075B634 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav16nA0A075B634 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav16nA0A075B634 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
Trav16nA0A075B634 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav16nA0A075B634 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav16nA0A075B634 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav16nA0A075B634 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav16nA0A075B634 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Trav16nA0A075B634 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Trav16nA0A075B634 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav16nA0A075B634 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav16nA0A075B634 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav16nA0A075B634 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC15.9■□□□□ 0.14
Trav16nA0A075B634 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav16nA0A075B634 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
Trav16nA0A075B634 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav16nA0A075B634 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Trav16nA0A075B634 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav16nA0A075B634 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav16nA0A075B634 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav16nA0A075B634 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav16nA0A075B634 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC15.89■□□□□ 0.13
Trav16nA0A075B634 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav16nA0A075B634 Gm8503-201ENSMUST00000118131 455 ntBASIC15.89■□□□□ 0.13
Trav16nA0A075B634 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Trav16nA0A075B634 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav16nA0A075B634 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav16nA0A075B634 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav16nA0A075B634 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav16nA0A075B634 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav16nA0A075B634 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav16nA0A075B634 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC15.88■□□□□ 0.13
Trav16nA0A075B634 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav16nA0A075B634 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav16nA0A075B634 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Trav16nA0A075B634 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC15.87■□□□□ 0.13
Trav16nA0A075B634 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav16nA0A075B634 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Trav16nA0A075B634 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav16nA0A075B634 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav16nA0A075B634 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC15.87■□□□□ 0.13
Trav16nA0A075B634 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav16nA0A075B634 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav16nA0A075B634 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav16nA0A075B634 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
Trav16nA0A075B634 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Trav16nA0A075B634 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Trav16nA0A075B634 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav16nA0A075B634 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav16nA0A075B634 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav16nA0A075B634 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav16nA0A075B634 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav16nA0A075B634 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav16nA0A075B634 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav16nA0A075B634 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav16nA0A075B634 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC15.85■□□□□ 0.13
Trav16nA0A075B634 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Trav16nA0A075B634 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav16nA0A075B634 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC15.85■□□□□ 0.13
Trav16nA0A075B634 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav16nA0A075B634 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms