Protein–RNA interactions for Protein: V9GX34

Csmd2, CUB and Sushi multiple domains 2, mousemouse

Predictions only

Length 3,611 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csmd2V9GX34 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC24.21■■□□□ 1.47
Csmd2V9GX34 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Csmd2V9GX34 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC24.19■■□□□ 1.46
Csmd2V9GX34 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC24.17■■□□□ 1.46
Csmd2V9GX34 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Csmd2V9GX34 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
Csmd2V9GX34 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Csmd2V9GX34 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Csmd2V9GX34 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC24.06■■□□□ 1.44
Csmd2V9GX34 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Csmd2V9GX34 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Csmd2V9GX34 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Csmd2V9GX34 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC24■■□□□ 1.43
Csmd2V9GX34 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Csmd2V9GX34 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
Csmd2V9GX34 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC23.89■■□□□ 1.41
Csmd2V9GX34 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.41
Csmd2V9GX34 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Csmd2V9GX34 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Csmd2V9GX34 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Csmd2V9GX34 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Csmd2V9GX34 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Csmd2V9GX34 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Csmd2V9GX34 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Csmd2V9GX34 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Csmd2V9GX34 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC23.83■■□□□ 1.4
Csmd2V9GX34 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Csmd2V9GX34 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Csmd2V9GX34 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Csmd2V9GX34 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Csmd2V9GX34 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Csmd2V9GX34 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Csmd2V9GX34 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC23.71■■□□□ 1.39
Csmd2V9GX34 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Csmd2V9GX34 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Csmd2V9GX34 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Csmd2V9GX34 Gm10524-201ENSMUST00000181931 1893 ntBASIC23.64■■□□□ 1.37
Csmd2V9GX34 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
Csmd2V9GX34 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC23.63■■□□□ 1.37
Csmd2V9GX34 Gm42596-201ENSMUST00000196305 1958 ntBASIC23.63■■□□□ 1.37
Csmd2V9GX34 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Csmd2V9GX34 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC23.6■■□□□ 1.37
Csmd2V9GX34 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.36
Csmd2V9GX34 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Csmd2V9GX34 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Csmd2V9GX34 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC23.54■■□□□ 1.36
Csmd2V9GX34 AC166822.3-201ENSMUST00000227394 661 ntBASIC23.53■■□□□ 1.36
Csmd2V9GX34 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Csmd2V9GX34 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Csmd2V9GX34 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Csmd2V9GX34 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Csmd2V9GX34 CT025624.2-201ENSMUST00000223609 1909 ntBASIC23.49■■□□□ 1.35
Csmd2V9GX34 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Csmd2V9GX34 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Csmd2V9GX34 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
Csmd2V9GX34 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC23.43■■□□□ 1.34
Csmd2V9GX34 Tdp2-203ENSMUST00000223804 1136 ntBASIC23.42■■□□□ 1.34
Csmd2V9GX34 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Csmd2V9GX34 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC23.41■■□□□ 1.34
Csmd2V9GX34 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
Csmd2V9GX34 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Csmd2V9GX34 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Csmd2V9GX34 Gm16148-201ENSMUST00000119653 893 ntBASIC23.39■■□□□ 1.33
Csmd2V9GX34 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Csmd2V9GX34 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
Csmd2V9GX34 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Csmd2V9GX34 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Csmd2V9GX34 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC23.35■■□□□ 1.33
Csmd2V9GX34 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC23.33■■□□□ 1.32
Csmd2V9GX34 Gm5987-201ENSMUST00000196433 1151 ntBASIC23.32■■□□□ 1.32
Csmd2V9GX34 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
Csmd2V9GX34 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Csmd2V9GX34 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Csmd2V9GX34 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Csmd2V9GX34 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Csmd2V9GX34 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Csmd2V9GX34 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Csmd2V9GX34 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Csmd2V9GX34 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Csmd2V9GX34 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Csmd2V9GX34 Gm45855-201ENSMUST00000212546 880 ntBASIC23.19■■□□□ 1.3
Csmd2V9GX34 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Csmd2V9GX34 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC23.18■■□□□ 1.3
Csmd2V9GX34 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Csmd2V9GX34 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Csmd2V9GX34 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC23.16■■□□□ 1.3
Csmd2V9GX34 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Csmd2V9GX34 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
Csmd2V9GX34 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC23.13■■□□□ 1.29
Csmd2V9GX34 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC23.12■■□□□ 1.29
Csmd2V9GX34 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Csmd2V9GX34 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
Csmd2V9GX34 AL845457.1-201ENSMUST00000197244 68 ntBASIC23.08■■□□□ 1.29
Csmd2V9GX34 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Csmd2V9GX34 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC23.08■■□□□ 1.29
Csmd2V9GX34 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Csmd2V9GX34 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Csmd2V9GX34 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Csmd2V9GX34 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Csmd2V9GX34 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms