Protein–RNA interactions for Protein: Q9R0S3

Mmp17, Matrix metalloproteinase-17, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp17Q9R0S3 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC26,57■■□□□ 1,84
Mmp17Q9R0S3 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26,53■■□□□ 1,84
Mmp17Q9R0S3 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC26,52■■□□□ 1,84
Mmp17Q9R0S3 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC26,51■■□□□ 1,83
Mmp17Q9R0S3 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC26,5■■□□□ 1,83
Mmp17Q9R0S3 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC26,5■■□□□ 1,83
Mmp17Q9R0S3 Gm27322-201ENSMUST00000184007 104 ntBASIC26,49■■□□□ 1,83
Mmp17Q9R0S3 Gm42596-201ENSMUST00000196305 1958 ntBASIC26,48■■□□□ 1,83
Mmp17Q9R0S3 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC26,45■■□□□ 1,83
Mmp17Q9R0S3 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC26,45■■□□□ 1,82
Mmp17Q9R0S3 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC26,41■■□□□ 1,82
Mmp17Q9R0S3 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26,41■■□□□ 1,82
Mmp17Q9R0S3 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC26,38■■□□□ 1,81
Mmp17Q9R0S3 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC26,38■■□□□ 1,81
Mmp17Q9R0S3 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26,37■■□□□ 1,81
Mmp17Q9R0S3 Gm24804-201ENSMUST00000174982 85 ntBASIC26,29■■□□□ 1,8
Mmp17Q9R0S3 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC26,25■■□□□ 1,79
Mmp17Q9R0S3 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26,19■■□□□ 1,78
Mmp17Q9R0S3 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC26,16■■□□□ 1,78
Mmp17Q9R0S3 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC26,15■■□□□ 1,78
Mmp17Q9R0S3 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26,15■■□□□ 1,78
Mmp17Q9R0S3 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC26,14■■□□□ 1,77
Mmp17Q9R0S3 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC26,11■■□□□ 1,77
Mmp17Q9R0S3 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC26,1■■□□□ 1,77
Mmp17Q9R0S3 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC26,09■■□□□ 1,77
Mmp17Q9R0S3 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC26,04■■□□□ 1,76
Mmp17Q9R0S3 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC26,02■■□□□ 1,76
Mmp17Q9R0S3 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25,99■■□□□ 1,75
Mmp17Q9R0S3 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC25,97■■□□□ 1,75
Mmp17Q9R0S3 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC25,9■■□□□ 1,74
Mmp17Q9R0S3 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC25,89■■□□□ 1,74
Mmp17Q9R0S3 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC25,88■■□□□ 1,73
Mmp17Q9R0S3 AC166822.3-201ENSMUST00000227394 661 ntBASIC25,88■■□□□ 1,73
Mmp17Q9R0S3 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC25,85■■□□□ 1,73
Mmp17Q9R0S3 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC25,84■■□□□ 1,73
Mmp17Q9R0S3 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC25,84■■□□□ 1,73
Mmp17Q9R0S3 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC25,83■■□□□ 1,73
Mmp17Q9R0S3 AL845457.1-201ENSMUST00000197244 68 ntBASIC25,82■■□□□ 1,72
Mmp17Q9R0S3 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC25,81■■□□□ 1,72
Mmp17Q9R0S3 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC25,81■■□□□ 1,72
Mmp17Q9R0S3 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC25,81■■□□□ 1,72
Mmp17Q9R0S3 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC25,8■■□□□ 1,72
Mmp17Q9R0S3 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC25,8■■□□□ 1,72
Mmp17Q9R0S3 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC25,79■■□□□ 1,72
Mmp17Q9R0S3 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC25,76■■□□□ 1,72
Mmp17Q9R0S3 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC25,76■■□□□ 1,71
Mmp17Q9R0S3 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC25,76■■□□□ 1,71
Mmp17Q9R0S3 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC25,73■■□□□ 1,71
Mmp17Q9R0S3 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC25,72■■□□□ 1,71
Mmp17Q9R0S3 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC25,72■■□□□ 1,71
Mmp17Q9R0S3 Zfp131-205ENSMUST00000223812 663 ntBASIC25,69■■□□□ 1,7
Mmp17Q9R0S3 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC25,66■■□□□ 1,7
Mmp17Q9R0S3 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC25,64■■□□□ 1,7
Mmp17Q9R0S3 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC25,61■■□□□ 1,69
Mmp17Q9R0S3 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC25,59■■□□□ 1,69
Mmp17Q9R0S3 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC25,57■■□□□ 1,68
Mmp17Q9R0S3 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC25,56■■□□□ 1,68
Mmp17Q9R0S3 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC25,54■■□□□ 1,68
Mmp17Q9R0S3 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC25,49■■□□□ 1,67
Mmp17Q9R0S3 Zfp131-207ENSMUST00000224946 1783 ntBASIC25,49■■□□□ 1,67
Mmp17Q9R0S3 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC25,47■■□□□ 1,67
Mmp17Q9R0S3 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC25,47■■□□□ 1,67
Mmp17Q9R0S3 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC25,46■■□□□ 1,67
Mmp17Q9R0S3 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC25,45■■□□□ 1,66
Mmp17Q9R0S3 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC25,45■■□□□ 1,66
Mmp17Q9R0S3 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25,44■■□□□ 1,66
Mmp17Q9R0S3 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC25,44■■□□□ 1,66
Mmp17Q9R0S3 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC25,43■■□□□ 1,66
Mmp17Q9R0S3 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC25,43■■□□□ 1,66
Mmp17Q9R0S3 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC25,41■■□□□ 1,66
Mmp17Q9R0S3 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC25,39■■□□□ 1,66
Mmp17Q9R0S3 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC25,38■■□□□ 1,65
Mmp17Q9R0S3 Gm16148-201ENSMUST00000119653 893 ntBASIC25,37■■□□□ 1,65
Mmp17Q9R0S3 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC25,35■■□□□ 1,65
Mmp17Q9R0S3 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC25,33■■□□□ 1,65
Mmp17Q9R0S3 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC25,32■■□□□ 1,64
Mmp17Q9R0S3 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC25,31■■□□□ 1,64
Mmp17Q9R0S3 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC25,31■■□□□ 1,64
Mmp17Q9R0S3 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC25,27■■□□□ 1,64
Mmp17Q9R0S3 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC25,26■■□□□ 1,63
Mmp17Q9R0S3 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC25,26■■□□□ 1,63
Mmp17Q9R0S3 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC25,26■■□□□ 1,63
Mmp17Q9R0S3 Peli2-204ENSMUST00000226513 1320 ntBASIC25,25■■□□□ 1,63
Mmp17Q9R0S3 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC25,24■■□□□ 1,63
Mmp17Q9R0S3 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC25,22■■□□□ 1,63
Mmp17Q9R0S3 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC25,21■■□□□ 1,63
Mmp17Q9R0S3 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC25,2■■□□□ 1,62
Mmp17Q9R0S3 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC25,19■■□□□ 1,62
Mmp17Q9R0S3 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC25,16■■□□□ 1,62
Mmp17Q9R0S3 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC25,16■■□□□ 1,62
Mmp17Q9R0S3 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC25,16■■□□□ 1,62
Mmp17Q9R0S3 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC25,15■■□□□ 1,62
Mmp17Q9R0S3 Mipep-204ENSMUST00000225043 1548 ntBASIC25,15■■□□□ 1,62
Mmp17Q9R0S3 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC25,13■■□□□ 1,61
Mmp17Q9R0S3 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC25,13■■□□□ 1,61
Mmp17Q9R0S3 Tdp2-203ENSMUST00000223804 1136 ntBASIC25,13■■□□□ 1,61
Mmp17Q9R0S3 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC25,12■■□□□ 1,61
Mmp17Q9R0S3 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC25,1■■□□□ 1,61
Mmp17Q9R0S3 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25,07■■□□□ 1,6
Mmp17Q9R0S3 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC25,07■■□□□ 1,6
Retrieved 100 of 76,532 protein–RNA pairs in 29,2 ms