Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Lysmd1Q9D0E3 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
Lysmd1Q9D0E3 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
Lysmd1Q9D0E3 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC31.94■■■□□ 2.7
Lysmd1Q9D0E3 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC31.89■■■□□ 2.7
Lysmd1Q9D0E3 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Lysmd1Q9D0E3 Gm5987-201ENSMUST00000196433 1151 ntBASIC31.84■■■□□ 2.69
Lysmd1Q9D0E3 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
Lysmd1Q9D0E3 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC31.78■■■□□ 2.68
Lysmd1Q9D0E3 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC31.77■■■□□ 2.68
Lysmd1Q9D0E3 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC31.77■■■□□ 2.68
Lysmd1Q9D0E3 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
Lysmd1Q9D0E3 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
Lysmd1Q9D0E3 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
Lysmd1Q9D0E3 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC31.63■■■□□ 2.65
Lysmd1Q9D0E3 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Lysmd1Q9D0E3 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Lysmd1Q9D0E3 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.61■■■□□ 2.65
Lysmd1Q9D0E3 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
Lysmd1Q9D0E3 Tdp2-203ENSMUST00000223804 1136 ntBASIC31.53■■■□□ 2.64
Lysmd1Q9D0E3 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC31.52■■■□□ 2.64
Lysmd1Q9D0E3 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC31.48■■■□□ 2.63
Lysmd1Q9D0E3 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC31.48■■■□□ 2.63
Lysmd1Q9D0E3 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
Lysmd1Q9D0E3 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC31.42■■■□□ 2.62
Lysmd1Q9D0E3 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC31.41■■■□□ 2.62
Lysmd1Q9D0E3 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC31.38■■■□□ 2.61
Lysmd1Q9D0E3 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
Lysmd1Q9D0E3 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
Lysmd1Q9D0E3 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC31.32■■■□□ 2.6
Lysmd1Q9D0E3 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31.29■■■□□ 2.6
Lysmd1Q9D0E3 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
Lysmd1Q9D0E3 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Lysmd1Q9D0E3 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Lysmd1Q9D0E3 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Lysmd1Q9D0E3 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Lysmd1Q9D0E3 Gm16148-201ENSMUST00000119653 893 ntBASIC31.21■■■□□ 2.59
Lysmd1Q9D0E3 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC31.13■■■□□ 2.57
Lysmd1Q9D0E3 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Lysmd1Q9D0E3 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC31.11■■■□□ 2.57
Lysmd1Q9D0E3 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
Lysmd1Q9D0E3 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC31.09■■■□□ 2.57
Lysmd1Q9D0E3 AC166822.3-201ENSMUST00000227394 661 ntBASIC31.09■■■□□ 2.57
Lysmd1Q9D0E3 Gm45855-201ENSMUST00000212546 880 ntBASIC31.08■■■□□ 2.57
Lysmd1Q9D0E3 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC31.07■■■□□ 2.56
Lysmd1Q9D0E3 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31.06■■■□□ 2.56
Lysmd1Q9D0E3 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
Lysmd1Q9D0E3 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC31.02■■■□□ 2.56
Lysmd1Q9D0E3 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC31.02■■■□□ 2.56
Lysmd1Q9D0E3 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.99■■■□□ 2.55
Lysmd1Q9D0E3 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC30.96■■■□□ 2.55
Lysmd1Q9D0E3 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.95■■■□□ 2.55
Lysmd1Q9D0E3 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Lysmd1Q9D0E3 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
Lysmd1Q9D0E3 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC30.93■■■□□ 2.54
Lysmd1Q9D0E3 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC30.92■■■□□ 2.54
Lysmd1Q9D0E3 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Lysmd1Q9D0E3 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.9■■■□□ 2.54
Lysmd1Q9D0E3 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC30.9■■■□□ 2.54
Lysmd1Q9D0E3 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC30.86■■■□□ 2.53
Lysmd1Q9D0E3 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
Lysmd1Q9D0E3 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC30.84■■■□□ 2.53
Lysmd1Q9D0E3 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC30.84■■■□□ 2.53
Lysmd1Q9D0E3 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Lysmd1Q9D0E3 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
Lysmd1Q9D0E3 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Lysmd1Q9D0E3 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Lysmd1Q9D0E3 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC30.75■■■□□ 2.51
Lysmd1Q9D0E3 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC30.72■■■□□ 2.51
Lysmd1Q9D0E3 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30.72■■■□□ 2.51
Lysmd1Q9D0E3 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Lysmd1Q9D0E3 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC30.69■■■□□ 2.5
Lysmd1Q9D0E3 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC30.68■■■□□ 2.5
Lysmd1Q9D0E3 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Lysmd1Q9D0E3 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
Lysmd1Q9D0E3 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Lysmd1Q9D0E3 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Lysmd1Q9D0E3 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC30.64■■■□□ 2.5
Lysmd1Q9D0E3 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC30.63■■■□□ 2.49
Lysmd1Q9D0E3 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Lysmd1Q9D0E3 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
Lysmd1Q9D0E3 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Lysmd1Q9D0E3 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC30.6■■■□□ 2.49
Lysmd1Q9D0E3 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Lysmd1Q9D0E3 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC30.57■■■□□ 2.48
Lysmd1Q9D0E3 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Lysmd1Q9D0E3 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
Lysmd1Q9D0E3 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC30.53■■■□□ 2.48
Lysmd1Q9D0E3 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Lysmd1Q9D0E3 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
Lysmd1Q9D0E3 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC30.47■■■□□ 2.47
Lysmd1Q9D0E3 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC30.45■■■□□ 2.47
Lysmd1Q9D0E3 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Lysmd1Q9D0E3 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC30.43■■■□□ 2.46
Lysmd1Q9D0E3 Gm9397-201ENSMUST00000200125 605 ntBASIC30.42■■■□□ 2.46
Lysmd1Q9D0E3 AL845457.1-201ENSMUST00000197244 68 ntBASIC30.41■■■□□ 2.46
Lysmd1Q9D0E3 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
Lysmd1Q9D0E3 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Lysmd1Q9D0E3 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
Lysmd1Q9D0E3 Peli2-204ENSMUST00000226513 1320 ntBASIC30.3■■■□□ 2.44
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms