Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC33.62■■■□□ 2.97
Col20a1Q923P0 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC33.61■■■□□ 2.97
Col20a1Q923P0 Gm8109-201ENSMUST00000194076 746 ntBASIC33.57■■■□□ 2.97
Col20a1Q923P0 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
Col20a1Q923P0 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC33.56■■■□□ 2.96
Col20a1Q923P0 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC33.51■■■□□ 2.95
Col20a1Q923P0 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC33.44■■■□□ 2.94
Col20a1Q923P0 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC33.4■■■□□ 2.94
Col20a1Q923P0 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC33.34■■■□□ 2.93
Col20a1Q923P0 Gm17082-201ENSMUST00000166043 1091 ntBASIC33.31■■■□□ 2.92
Col20a1Q923P0 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.91
Col20a1Q923P0 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC33.24■■■□□ 2.91
Col20a1Q923P0 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
Col20a1Q923P0 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
Col20a1Q923P0 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
Col20a1Q923P0 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
Col20a1Q923P0 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC33.18■■■□□ 2.9
Col20a1Q923P0 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC33.18■■■□□ 2.9
Col20a1Q923P0 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
Col20a1Q923P0 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
Col20a1Q923P0 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC33.11■■■□□ 2.89
Col20a1Q923P0 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC33.08■■■□□ 2.89
Col20a1Q923P0 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
Col20a1Q923P0 Gm27322-201ENSMUST00000184007 104 ntBASIC33.05■■■□□ 2.88
Col20a1Q923P0 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
Col20a1Q923P0 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
Col20a1Q923P0 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC33.02■■■□□ 2.88
Col20a1Q923P0 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC32.94■■■□□ 2.86
Col20a1Q923P0 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC32.84■■■□□ 2.85
Col20a1Q923P0 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC32.83■■■□□ 2.85
Col20a1Q923P0 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC32.82■■■□□ 2.84
Col20a1Q923P0 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
Col20a1Q923P0 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC32.77■■■□□ 2.84
Col20a1Q923P0 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
Col20a1Q923P0 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC32.65■■■□□ 2.82
Col20a1Q923P0 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Col20a1Q923P0 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Col20a1Q923P0 AL845457.1-201ENSMUST00000197244 68 ntBASIC32.62■■■□□ 2.81
Col20a1Q923P0 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
Col20a1Q923P0 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
Col20a1Q923P0 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC32.57■■■□□ 2.81
Col20a1Q923P0 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
Col20a1Q923P0 Gm24804-201ENSMUST00000174982 85 ntBASIC32.54■■■□□ 2.8
Col20a1Q923P0 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC32.53■■■□□ 2.8
Col20a1Q923P0 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC32.53■■■□□ 2.8
Col20a1Q923P0 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC32.51■■■□□ 2.8
Col20a1Q923P0 AC166822.3-201ENSMUST00000227394 661 ntBASIC32.51■■■□□ 2.8
Col20a1Q923P0 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC32.51■■■□□ 2.8
Col20a1Q923P0 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC32.51■■■□□ 2.79
Col20a1Q923P0 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC32.51■■■□□ 2.79
Col20a1Q923P0 Zfp131-207ENSMUST00000224946 1783 ntBASIC32.5■■■□□ 2.79
Col20a1Q923P0 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Col20a1Q923P0 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Col20a1Q923P0 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Col20a1Q923P0 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC32.36■■■□□ 2.77
Col20a1Q923P0 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.77
Col20a1Q923P0 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
Col20a1Q923P0 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC32.3■■■□□ 2.76
Col20a1Q923P0 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Col20a1Q923P0 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
Col20a1Q923P0 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC32.22■■■□□ 2.75
Col20a1Q923P0 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
Col20a1Q923P0 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Col20a1Q923P0 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
Col20a1Q923P0 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
Col20a1Q923P0 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC32.09■■■□□ 2.73
Col20a1Q923P0 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Col20a1Q923P0 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC32.07■■■□□ 2.72
Col20a1Q923P0 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
Col20a1Q923P0 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
Col20a1Q923P0 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
Col20a1Q923P0 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Col20a1Q923P0 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
Col20a1Q923P0 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC32■■■□□ 2.71
Col20a1Q923P0 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC32■■■□□ 2.71
Col20a1Q923P0 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Col20a1Q923P0 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
Col20a1Q923P0 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
Col20a1Q923P0 Mipep-204ENSMUST00000225043 1548 ntBASIC31.92■■■□□ 2.7
Col20a1Q923P0 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Col20a1Q923P0 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC31.91■■■□□ 2.7
Col20a1Q923P0 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC31.89■■■□□ 2.7
Col20a1Q923P0 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Col20a1Q923P0 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Col20a1Q923P0 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
Col20a1Q923P0 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC31.78■■■□□ 2.68
Col20a1Q923P0 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC31.78■■■□□ 2.68
Col20a1Q923P0 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Col20a1Q923P0 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Col20a1Q923P0 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
Col20a1Q923P0 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC31.74■■■□□ 2.67
Col20a1Q923P0 Zfp131-205ENSMUST00000223812 663 ntBASIC31.73■■■□□ 2.67
Col20a1Q923P0 Peli2-204ENSMUST00000226513 1320 ntBASIC31.72■■■□□ 2.67
Col20a1Q923P0 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Col20a1Q923P0 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC31.71■■■□□ 2.67
Col20a1Q923P0 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
Col20a1Q923P0 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC31.67■■■□□ 2.66
Col20a1Q923P0 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
Col20a1Q923P0 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC31.65■■■□□ 2.66
Col20a1Q923P0 Gm16148-201ENSMUST00000119653 893 ntBASIC31.64■■■□□ 2.66
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms