Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC33,62■■■□□ 2,97
Col20a1Q923P0 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC33,61■■■□□ 2,97
Col20a1Q923P0 Gm8109-201ENSMUST00000194076 746 ntBASIC33,57■■■□□ 2,97
Col20a1Q923P0 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC33,56■■■□□ 2,96
Col20a1Q923P0 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC33,56■■■□□ 2,96
Col20a1Q923P0 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC33,51■■■□□ 2,95
Col20a1Q923P0 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC33,44■■■□□ 2,94
Col20a1Q923P0 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC33,4■■■□□ 2,94
Col20a1Q923P0 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC33,34■■■□□ 2,93
Col20a1Q923P0 Gm17082-201ENSMUST00000166043 1091 ntBASIC33,31■■■□□ 2,92
Col20a1Q923P0 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC33,26■■■□□ 2,91
Col20a1Q923P0 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC33,24■■■□□ 2,91
Col20a1Q923P0 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC33,23■■■□□ 2,91
Col20a1Q923P0 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC33,22■■■□□ 2,91
Col20a1Q923P0 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC33,2■■■□□ 2,91
Col20a1Q923P0 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC33,19■■■□□ 2,9
Col20a1Q923P0 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC33,18■■■□□ 2,9
Col20a1Q923P0 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC33,18■■■□□ 2,9
Col20a1Q923P0 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC33,16■■■□□ 2,9
Col20a1Q923P0 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC33,15■■■□□ 2,9
Col20a1Q923P0 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC33,11■■■□□ 2,89
Col20a1Q923P0 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC33,08■■■□□ 2,89
Col20a1Q923P0 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC33,06■■■□□ 2,88
Col20a1Q923P0 Gm27322-201ENSMUST00000184007 104 ntBASIC33,05■■■□□ 2,88
Col20a1Q923P0 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC33,05■■■□□ 2,88
Col20a1Q923P0 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC33,04■■■□□ 2,88
Col20a1Q923P0 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC33,02■■■□□ 2,88
Col20a1Q923P0 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC32,94■■■□□ 2,86
Col20a1Q923P0 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC32,84■■■□□ 2,85
Col20a1Q923P0 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC32,83■■■□□ 2,85
Col20a1Q923P0 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC32,82■■■□□ 2,84
Col20a1Q923P0 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC32,79■■■□□ 2,84
Col20a1Q923P0 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC32,77■■■□□ 2,84
Col20a1Q923P0 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC32,72■■■□□ 2,83
Col20a1Q923P0 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC32,65■■■□□ 2,82
Col20a1Q923P0 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC32,63■■■□□ 2,81
Col20a1Q923P0 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC32,63■■■□□ 2,81
Col20a1Q923P0 AL845457.1-201ENSMUST00000197244 68 ntBASIC32,62■■■□□ 2,81
Col20a1Q923P0 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC32,61■■■□□ 2,81
Col20a1Q923P0 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC32,58■■■□□ 2,81
Col20a1Q923P0 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC32,57■■■□□ 2,81
Col20a1Q923P0 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC32,57■■■□□ 2,8
Col20a1Q923P0 Gm24804-201ENSMUST00000174982 85 ntBASIC32,54■■■□□ 2,8
Col20a1Q923P0 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC32,53■■■□□ 2,8
Col20a1Q923P0 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC32,53■■■□□ 2,8
Col20a1Q923P0 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC32,51■■■□□ 2,8
Col20a1Q923P0 AC166822.3-201ENSMUST00000227394 661 ntBASIC32,51■■■□□ 2,8
Col20a1Q923P0 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC32,51■■■□□ 2,8
Col20a1Q923P0 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC32,51■■■□□ 2,79
Col20a1Q923P0 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC32,51■■■□□ 2,79
Col20a1Q923P0 Zfp131-207ENSMUST00000224946 1783 ntBASIC32,5■■■□□ 2,79
Col20a1Q923P0 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC32,5■■■□□ 2,79
Col20a1Q923P0 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC32,43■■■□□ 2,78
Col20a1Q923P0 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC32,4■■■□□ 2,78
Col20a1Q923P0 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC32,36■■■□□ 2,77
Col20a1Q923P0 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC32,32■■■□□ 2,77
Col20a1Q923P0 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC32,3■■■□□ 2,76
Col20a1Q923P0 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC32,3■■■□□ 2,76
Col20a1Q923P0 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC32,25■■■□□ 2,75
Col20a1Q923P0 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC32,23■■■□□ 2,75
Col20a1Q923P0 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC32,22■■■□□ 2,75
Col20a1Q923P0 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC32,18■■■□□ 2,74
Col20a1Q923P0 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC32,17■■■□□ 2,74
Col20a1Q923P0 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC32,14■■■□□ 2,74
Col20a1Q923P0 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC32,13■■■□□ 2,73
Col20a1Q923P0 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC32,09■■■□□ 2,73
Col20a1Q923P0 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC32,08■■■□□ 2,73
Col20a1Q923P0 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC32,07■■■□□ 2,72
Col20a1Q923P0 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC32,07■■■□□ 2,72
Col20a1Q923P0 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC32,05■■■□□ 2,72
Col20a1Q923P0 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC32,04■■■□□ 2,72
Col20a1Q923P0 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC32,02■■■□□ 2,72
Col20a1Q923P0 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC32,02■■■□□ 2,72
Col20a1Q923P0 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC32■■■□□ 2,71
Col20a1Q923P0 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC32■■■□□ 2,71
Col20a1Q923P0 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC31,98■■■□□ 2,71
Col20a1Q923P0 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC31,94■■■□□ 2,7
Col20a1Q923P0 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC31,93■■■□□ 2,7
Col20a1Q923P0 Mipep-204ENSMUST00000225043 1548 ntBASIC31,92■■■□□ 2,7
Col20a1Q923P0 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC31,91■■■□□ 2,7
Col20a1Q923P0 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC31,91■■■□□ 2,7
Col20a1Q923P0 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC31,89■■■□□ 2,7
Col20a1Q923P0 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC31,89■■■□□ 2,7
Col20a1Q923P0 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC31,87■■■□□ 2,69
Col20a1Q923P0 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC31,79■■■□□ 2,68
Col20a1Q923P0 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC31,78■■■□□ 2,68
Col20a1Q923P0 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC31,78■■■□□ 2,68
Col20a1Q923P0 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC31,76■■■□□ 2,67
Col20a1Q923P0 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC31,75■■■□□ 2,67
Col20a1Q923P0 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC31,75■■■□□ 2,67
Col20a1Q923P0 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC31,74■■■□□ 2,67
Col20a1Q923P0 Zfp131-205ENSMUST00000223812 663 ntBASIC31,73■■■□□ 2,67
Col20a1Q923P0 Peli2-204ENSMUST00000226513 1320 ntBASIC31,72■■■□□ 2,67
Col20a1Q923P0 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC31,72■■■□□ 2,67
Col20a1Q923P0 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC31,71■■■□□ 2,67
Col20a1Q923P0 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC31,7■■■□□ 2,67
Col20a1Q923P0 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC31,67■■■□□ 2,66
Col20a1Q923P0 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC31,66■■■□□ 2,66
Col20a1Q923P0 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC31,65■■■□□ 2,66
Col20a1Q923P0 Gm16148-201ENSMUST00000119653 893 ntBASIC31,64■■■□□ 2,66
Retrieved 100 of 76,532 protein–RNA pairs in 11,3 ms