Protein–RNA interactions for Protein: Q91XX5

Pcdhgb5, Protocadherin gamma B5, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb5Q91XX5 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Pcdhgb5Q91XX5 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Pcdhgb5Q91XX5 Gm17082-201ENSMUST00000166043 1091 ntBASIC28.01■■■□□ 2.07
Pcdhgb5Q91XX5 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.95■■■□□ 2.07
Pcdhgb5Q91XX5 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Pcdhgb5Q91XX5 Gm42596-201ENSMUST00000196305 1958 ntBASIC27.95■■■□□ 2.06
Pcdhgb5Q91XX5 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Pcdhgb5Q91XX5 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
Pcdhgb5Q91XX5 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC27.89■■■□□ 2.06
Pcdhgb5Q91XX5 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
Pcdhgb5Q91XX5 Gm27322-201ENSMUST00000184007 104 ntBASIC27.88■■■□□ 2.05
Pcdhgb5Q91XX5 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC27.82■■■□□ 2.04
Pcdhgb5Q91XX5 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC27.81■■■□□ 2.04
Pcdhgb5Q91XX5 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
Pcdhgb5Q91XX5 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Pcdhgb5Q91XX5 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
Pcdhgb5Q91XX5 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27.67■■■□□ 2.02
Pcdhgb5Q91XX5 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
Pcdhgb5Q91XX5 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
Pcdhgb5Q91XX5 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Pcdhgb5Q91XX5 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC27.58■■■□□ 2.01
Pcdhgb5Q91XX5 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC27.53■■■□□ 2
Pcdhgb5Q91XX5 Gm24804-201ENSMUST00000174982 85 ntBASIC27.52■■■□□ 2
Pcdhgb5Q91XX5 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Pcdhgb5Q91XX5 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC27.46■■□□□ 1.99
Pcdhgb5Q91XX5 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC27.45■■□□□ 1.98
Pcdhgb5Q91XX5 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Pcdhgb5Q91XX5 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Pcdhgb5Q91XX5 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC27.4■■□□□ 1.98
Pcdhgb5Q91XX5 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Pcdhgb5Q91XX5 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Pcdhgb5Q91XX5 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Pcdhgb5Q91XX5 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC27.33■■□□□ 1.97
Pcdhgb5Q91XX5 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC27.28■■□□□ 1.96
Pcdhgb5Q91XX5 AC166822.3-201ENSMUST00000227394 661 ntBASIC27.26■■□□□ 1.95
Pcdhgb5Q91XX5 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Pcdhgb5Q91XX5 AL845457.1-201ENSMUST00000197244 68 ntBASIC27.22■■□□□ 1.95
Pcdhgb5Q91XX5 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Pcdhgb5Q91XX5 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Pcdhgb5Q91XX5 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC27.18■■□□□ 1.94
Pcdhgb5Q91XX5 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Pcdhgb5Q91XX5 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC27.16■■□□□ 1.94
Pcdhgb5Q91XX5 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
Pcdhgb5Q91XX5 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Pcdhgb5Q91XX5 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Pcdhgb5Q91XX5 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Pcdhgb5Q91XX5 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Pcdhgb5Q91XX5 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Pcdhgb5Q91XX5 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Pcdhgb5Q91XX5 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Pcdhgb5Q91XX5 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC27.06■■□□□ 1.92
Pcdhgb5Q91XX5 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC27.06■■□□□ 1.92
Pcdhgb5Q91XX5 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Pcdhgb5Q91XX5 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC27.01■■□□□ 1.91
Pcdhgb5Q91XX5 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Pcdhgb5Q91XX5 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC26.96■■□□□ 1.91
Pcdhgb5Q91XX5 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Pcdhgb5Q91XX5 Zfp131-205ENSMUST00000223812 663 ntBASIC26.91■■□□□ 1.9
Pcdhgb5Q91XX5 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Pcdhgb5Q91XX5 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Pcdhgb5Q91XX5 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
Pcdhgb5Q91XX5 Zfp131-207ENSMUST00000224946 1783 ntBASIC26.88■■□□□ 1.89
Pcdhgb5Q91XX5 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Pcdhgb5Q91XX5 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Pcdhgb5Q91XX5 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC26.78■■□□□ 1.88
Pcdhgb5Q91XX5 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Pcdhgb5Q91XX5 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Pcdhgb5Q91XX5 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Pcdhgb5Q91XX5 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Pcdhgb5Q91XX5 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
Pcdhgb5Q91XX5 Gm16148-201ENSMUST00000119653 893 ntBASIC26.72■■□□□ 1.87
Pcdhgb5Q91XX5 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC26.69■■□□□ 1.86
Pcdhgb5Q91XX5 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Pcdhgb5Q91XX5 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Pcdhgb5Q91XX5 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC26.65■■□□□ 1.86
Pcdhgb5Q91XX5 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Pcdhgb5Q91XX5 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.85
Pcdhgb5Q91XX5 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC26.64■■□□□ 1.85
Pcdhgb5Q91XX5 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Pcdhgb5Q91XX5 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Pcdhgb5Q91XX5 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Pcdhgb5Q91XX5 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
Pcdhgb5Q91XX5 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Pcdhgb5Q91XX5 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Pcdhgb5Q91XX5 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
Pcdhgb5Q91XX5 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Pcdhgb5Q91XX5 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Pcdhgb5Q91XX5 Peli2-204ENSMUST00000226513 1320 ntBASIC26.56■■□□□ 1.84
Pcdhgb5Q91XX5 Mipep-204ENSMUST00000225043 1548 ntBASIC26.55■■□□□ 1.84
Pcdhgb5Q91XX5 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
Pcdhgb5Q91XX5 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
Pcdhgb5Q91XX5 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
Pcdhgb5Q91XX5 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC26.49■■□□□ 1.83
Pcdhgb5Q91XX5 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
Pcdhgb5Q91XX5 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Pcdhgb5Q91XX5 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Pcdhgb5Q91XX5 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Pcdhgb5Q91XX5 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Pcdhgb5Q91XX5 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC26.41■■□□□ 1.82
Pcdhgb5Q91XX5 Tdp2-203ENSMUST00000223804 1136 ntBASIC26.4■■□□□ 1.82
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms