Protein–RNA interactions for Protein: Q8VIJ6

Sfpq, Splicing factor, proline- and glutamine-rich, mousemouse

Known RBP Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfpqQ8VIJ6 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC28,82■■■□□ 2,2
SfpqQ8VIJ6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC28,8■■■□□ 2,2
SfpqQ8VIJ6 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC28,78■■■□□ 2,2
SfpqQ8VIJ6 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC28,73■■■□□ 2,19
SfpqQ8VIJ6 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC28,73■■■□□ 2,19
SfpqQ8VIJ6 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC28,72■■■□□ 2,19
SfpqQ8VIJ6 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC28,69■■■□□ 2,18
SfpqQ8VIJ6 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC28,68■■■□□ 2,18
SfpqQ8VIJ6 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC28,66■■■□□ 2,18
SfpqQ8VIJ6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC28,64■■■□□ 2,18
SfpqQ8VIJ6 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28,6■■■□□ 2,17
SfpqQ8VIJ6 Gm25238-201ENSMUST00000174914 89 ntBASIC28,54■■■□□ 2,16
SfpqQ8VIJ6 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC28,54■■■□□ 2,16
SfpqQ8VIJ6 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC28,53■■■□□ 2,16
SfpqQ8VIJ6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC28,53■■■□□ 2,16
SfpqQ8VIJ6 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28,52■■■□□ 2,16
SfpqQ8VIJ6 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC28,52■■■□□ 2,16
SfpqQ8VIJ6 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC28,51■■■□□ 2,16
SfpqQ8VIJ6 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC28,5■■■□□ 2,15
SfpqQ8VIJ6 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC28,47■■■□□ 2,15
SfpqQ8VIJ6 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC28,47■■■□□ 2,15
SfpqQ8VIJ6 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC28,45■■■□□ 2,15
SfpqQ8VIJ6 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC28,43■■■□□ 2,14
SfpqQ8VIJ6 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC28,38■■■□□ 2,13
SfpqQ8VIJ6 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC28,35■■■□□ 2,13
SfpqQ8VIJ6 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC28,34■■■□□ 2,13
SfpqQ8VIJ6 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC28,32■■■□□ 2,12
SfpqQ8VIJ6 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC28,32■■■□□ 2,12
SfpqQ8VIJ6 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC28,29■■■□□ 2,12
SfpqQ8VIJ6 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28,28■■■□□ 2,12
SfpqQ8VIJ6 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC28,27■■■□□ 2,12
SfpqQ8VIJ6 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC28,24■■■□□ 2,11
SfpqQ8VIJ6 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28,23■■■□□ 2,11
SfpqQ8VIJ6 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC28,22■■■□□ 2,11
SfpqQ8VIJ6 Zfp131-207ENSMUST00000224946 1783 ntBASIC28,17■■■□□ 2,1
SfpqQ8VIJ6 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC28,16■■■□□ 2,1
SfpqQ8VIJ6 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC28,13■■■□□ 2,09
SfpqQ8VIJ6 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28,1■■■□□ 2,09
SfpqQ8VIJ6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC28,09■■■□□ 2,09
SfpqQ8VIJ6 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC28,03■■■□□ 2,08
SfpqQ8VIJ6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC28,02■■■□□ 2,08
SfpqQ8VIJ6 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC28,01■■■□□ 2,07
SfpqQ8VIJ6 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2,07
SfpqQ8VIJ6 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC28■■■□□ 2,07
SfpqQ8VIJ6 Gm2415-204ENSMUST00000190235 2004 ntBASIC28■■■□□ 2,07
SfpqQ8VIJ6 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC27,98■■■□□ 2,07
SfpqQ8VIJ6 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC27,95■■■□□ 2,07
SfpqQ8VIJ6 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC27,95■■■□□ 2,06
SfpqQ8VIJ6 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC27,95■■■□□ 2,06
SfpqQ8VIJ6 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC27,93■■■□□ 2,06
SfpqQ8VIJ6 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC27,93■■■□□ 2,06
SfpqQ8VIJ6 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC27,92■■■□□ 2,06
SfpqQ8VIJ6 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC27,91■■■□□ 2,06
SfpqQ8VIJ6 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC27,9■■■□□ 2,06
SfpqQ8VIJ6 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC27,9■■■□□ 2,06
SfpqQ8VIJ6 Rab21-202ENSMUST00000218831 843 ntBASIC27,87■■■□□ 2,05
SfpqQ8VIJ6 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC27,85■■■□□ 2,05
SfpqQ8VIJ6 Gm6658-202ENSMUST00000209493 1885 ntBASIC27,84■■■□□ 2,05
SfpqQ8VIJ6 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC27,83■■■□□ 2,05
SfpqQ8VIJ6 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC27,83■■■□□ 2,05
SfpqQ8VIJ6 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC27,83■■■□□ 2,05
SfpqQ8VIJ6 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27,8■■■□□ 2,04
SfpqQ8VIJ6 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC27,78■■■□□ 2,04
SfpqQ8VIJ6 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC27,78■■■□□ 2,04
SfpqQ8VIJ6 AC153504.1-201ENSMUST00000218379 2290 ntBASIC27,76■■■□□ 2,03
SfpqQ8VIJ6 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC27,75■■■□□ 2,03
SfpqQ8VIJ6 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC27,74■■■□□ 2,03
SfpqQ8VIJ6 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC27,69■■■□□ 2,02
SfpqQ8VIJ6 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC27,68■■■□□ 2,02
SfpqQ8VIJ6 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC27,67■■■□□ 2,02
SfpqQ8VIJ6 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC27,67■■■□□ 2,02
SfpqQ8VIJ6 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC27,66■■■□□ 2,02
SfpqQ8VIJ6 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC27,66■■■□□ 2,02
SfpqQ8VIJ6 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC27,66■■■□□ 2,02
SfpqQ8VIJ6 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC27,66■■■□□ 2,02
SfpqQ8VIJ6 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC27,65■■■□□ 2,02
SfpqQ8VIJ6 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC27,64■■■□□ 2,01
SfpqQ8VIJ6 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC27,63■■■□□ 2,01
SfpqQ8VIJ6 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC27,62■■■□□ 2,01
SfpqQ8VIJ6 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC27,61■■■□□ 2,01
SfpqQ8VIJ6 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27,6■■■□□ 2,01
SfpqQ8VIJ6 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC27,59■■■□□ 2,01
SfpqQ8VIJ6 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC27,58■■■□□ 2,01
SfpqQ8VIJ6 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC27,54■■■□□ 2
SfpqQ8VIJ6 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC27,52■■■□□ 2
SfpqQ8VIJ6 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC27,51■■□□□ 1,99
SfpqQ8VIJ6 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC27,51■■□□□ 1,99
SfpqQ8VIJ6 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC27,49■■□□□ 1,99
SfpqQ8VIJ6 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC27,49■■□□□ 1,99
SfpqQ8VIJ6 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC27,47■■□□□ 1,99
SfpqQ8VIJ6 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC27,47■■□□□ 1,99
SfpqQ8VIJ6 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC27,46■■□□□ 1,99
SfpqQ8VIJ6 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC27,45■■□□□ 1,99
SfpqQ8VIJ6 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC27,44■■□□□ 1,98
SfpqQ8VIJ6 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC27,43■■□□□ 1,98
SfpqQ8VIJ6 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC27,42■■□□□ 1,98
SfpqQ8VIJ6 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC27,41■■□□□ 1,98
SfpqQ8VIJ6 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC27,4■■□□□ 1,98
SfpqQ8VIJ6 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC27,39■■□□□ 1,97
SfpqQ8VIJ6 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC27,38■■□□□ 1,97
Retrieved 100 of 76,532 protein–RNA pairs in 11,7 ms