Protein–RNA interactions for Protein: Q8VIG3

Rsph1, Radial spoke head 1 homolog, mousemouse

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph1Q8VIG3 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC29,79■■■□□ 2,36
Rsph1Q8VIG3 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29,78■■■□□ 2,36
Rsph1Q8VIG3 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC29,76■■■□□ 2,36
Rsph1Q8VIG3 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC29,75■■■□□ 2,35
Rsph1Q8VIG3 Gm42596-201ENSMUST00000196305 1958 ntBASIC29,68■■■□□ 2,34
Rsph1Q8VIG3 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC29,62■■■□□ 2,33
Rsph1Q8VIG3 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC29,62■■■□□ 2,33
Rsph1Q8VIG3 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC29,59■■■□□ 2,33
Rsph1Q8VIG3 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC29,56■■■□□ 2,32
Rsph1Q8VIG3 Gm27322-201ENSMUST00000184007 104 ntBASIC29,56■■■□□ 2,32
Rsph1Q8VIG3 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC29,54■■■□□ 2,32
Rsph1Q8VIG3 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC29,5■■■□□ 2,31
Rsph1Q8VIG3 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC29,5■■■□□ 2,31
Rsph1Q8VIG3 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC29,48■■■□□ 2,31
Rsph1Q8VIG3 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29,43■■■□□ 2,3
Rsph1Q8VIG3 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC29,43■■■□□ 2,3
Rsph1Q8VIG3 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC29,4■■■□□ 2,3
Rsph1Q8VIG3 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC29,39■■■□□ 2,3
Rsph1Q8VIG3 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC29,31■■■□□ 2,28
Rsph1Q8VIG3 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC29,26■■■□□ 2,27
Rsph1Q8VIG3 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC29,25■■■□□ 2,27
Rsph1Q8VIG3 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC29,24■■■□□ 2,27
Rsph1Q8VIG3 Gm24804-201ENSMUST00000174982 85 ntBASIC29,23■■■□□ 2,27
Rsph1Q8VIG3 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC29,22■■■□□ 2,27
Rsph1Q8VIG3 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29,2■■■□□ 2,26
Rsph1Q8VIG3 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC29,2■■■□□ 2,26
Rsph1Q8VIG3 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC29,18■■■□□ 2,26
Rsph1Q8VIG3 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC29,13■■■□□ 2,25
Rsph1Q8VIG3 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC29,13■■■□□ 2,25
Rsph1Q8VIG3 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC29,09■■■□□ 2,25
Rsph1Q8VIG3 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC29,07■■■□□ 2,24
Rsph1Q8VIG3 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC29,05■■■□□ 2,24
Rsph1Q8VIG3 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC29,02■■■□□ 2,24
Rsph1Q8VIG3 AC166822.3-201ENSMUST00000227394 661 ntBASIC29,01■■■□□ 2,23
Rsph1Q8VIG3 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC28,96■■■□□ 2,23
Rsph1Q8VIG3 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC28,93■■■□□ 2,22
Rsph1Q8VIG3 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC28,93■■■□□ 2,22
Rsph1Q8VIG3 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC28,92■■■□□ 2,22
Rsph1Q8VIG3 AL845457.1-201ENSMUST00000197244 68 ntBASIC28,9■■■□□ 2,22
Rsph1Q8VIG3 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC28,89■■■□□ 2,22
Rsph1Q8VIG3 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC28,84■■■□□ 2,21
Rsph1Q8VIG3 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC28,82■■■□□ 2,2
Rsph1Q8VIG3 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC28,82■■■□□ 2,2
Rsph1Q8VIG3 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC28,81■■■□□ 2,2
Rsph1Q8VIG3 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC28,81■■■□□ 2,2
Rsph1Q8VIG3 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC28,79■■■□□ 2,2
Rsph1Q8VIG3 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC28,78■■■□□ 2,2
Rsph1Q8VIG3 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC28,77■■■□□ 2,2
Rsph1Q8VIG3 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC28,76■■■□□ 2,19
Rsph1Q8VIG3 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC28,75■■■□□ 2,19
Rsph1Q8VIG3 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC28,71■■■□□ 2,19
Rsph1Q8VIG3 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC28,7■■■□□ 2,19
Rsph1Q8VIG3 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC28,69■■■□□ 2,18
Rsph1Q8VIG3 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC28,67■■■□□ 2,18
Rsph1Q8VIG3 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC28,66■■■□□ 2,18
Rsph1Q8VIG3 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC28,64■■■□□ 2,18
Rsph1Q8VIG3 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC28,63■■■□□ 2,17
Rsph1Q8VIG3 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC28,61■■■□□ 2,17
Rsph1Q8VIG3 Zfp131-207ENSMUST00000224946 1783 ntBASIC28,59■■■□□ 2,17
Rsph1Q8VIG3 Zfp131-205ENSMUST00000223812 663 ntBASIC28,57■■■□□ 2,16
Rsph1Q8VIG3 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC28,54■■■□□ 2,16
Rsph1Q8VIG3 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC28,49■■■□□ 2,15
Rsph1Q8VIG3 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC28,49■■■□□ 2,15
Rsph1Q8VIG3 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC28,48■■■□□ 2,15
Rsph1Q8VIG3 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC28,48■■■□□ 2,15
Rsph1Q8VIG3 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC28,47■■■□□ 2,15
Rsph1Q8VIG3 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC28,46■■■□□ 2,15
Rsph1Q8VIG3 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC28,46■■■□□ 2,15
Rsph1Q8VIG3 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC28,44■■■□□ 2,14
Rsph1Q8VIG3 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28,44■■■□□ 2,14
Rsph1Q8VIG3 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC28,4■■■□□ 2,14
Rsph1Q8VIG3 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC28,4■■■□□ 2,14
Rsph1Q8VIG3 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC28,39■■■□□ 2,14
Rsph1Q8VIG3 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC28,37■■■□□ 2,13
Rsph1Q8VIG3 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC28,34■■■□□ 2,13
Rsph1Q8VIG3 Gm16148-201ENSMUST00000119653 893 ntBASIC28,34■■■□□ 2,13
Rsph1Q8VIG3 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC28,32■■■□□ 2,12
Rsph1Q8VIG3 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC28,32■■■□□ 2,12
Rsph1Q8VIG3 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC28,31■■■□□ 2,12
Rsph1Q8VIG3 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC28,28■■■□□ 2,12
Rsph1Q8VIG3 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC28,27■■■□□ 2,12
Rsph1Q8VIG3 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC28,26■■■□□ 2,11
Rsph1Q8VIG3 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC28,25■■■□□ 2,11
Rsph1Q8VIG3 Peli2-204ENSMUST00000226513 1320 ntBASIC28,24■■■□□ 2,11
Rsph1Q8VIG3 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC28,2■■■□□ 2,1
Rsph1Q8VIG3 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC28,2■■■□□ 2,1
Rsph1Q8VIG3 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC28,19■■■□□ 2,1
Rsph1Q8VIG3 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC28,19■■■□□ 2,1
Rsph1Q8VIG3 Mipep-204ENSMUST00000225043 1548 ntBASIC28,18■■■□□ 2,1
Rsph1Q8VIG3 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC28,16■■■□□ 2,1
Rsph1Q8VIG3 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC28,15■■■□□ 2,1
Rsph1Q8VIG3 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC28,15■■■□□ 2,1
Rsph1Q8VIG3 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC28,1■■■□□ 2,09
Rsph1Q8VIG3 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC28,1■■■□□ 2,09
Rsph1Q8VIG3 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC28,08■■■□□ 2,09
Rsph1Q8VIG3 Tdp2-203ENSMUST00000223804 1136 ntBASIC28,06■■■□□ 2,08
Rsph1Q8VIG3 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC28,05■■■□□ 2,08
Rsph1Q8VIG3 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC28,04■■■□□ 2,08
Rsph1Q8VIG3 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC28,03■■■□□ 2,08
Rsph1Q8VIG3 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC28,03■■■□□ 2,08
Retrieved 100 of 76,532 protein–RNA pairs in 19,8 ms