Protein–RNA interactions for Protein: Q8VCZ8

Rpusd1, RNA pseudouridylate synthase domain-containing protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpusd1Q8VCZ8 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC27.3■■□□□ 1.96
Rpusd1Q8VCZ8 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC27.26■■□□□ 1.95
Rpusd1Q8VCZ8 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC27.24■■□□□ 1.95
Rpusd1Q8VCZ8 Gm17082-201ENSMUST00000166043 1091 ntBASIC27.18■■□□□ 1.94
Rpusd1Q8VCZ8 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Rpusd1Q8VCZ8 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27.17■■□□□ 1.94
Rpusd1Q8VCZ8 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Rpusd1Q8VCZ8 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Rpusd1Q8VCZ8 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Rpusd1Q8VCZ8 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Rpusd1Q8VCZ8 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Rpusd1Q8VCZ8 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Rpusd1Q8VCZ8 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC26.99■■□□□ 1.91
Rpusd1Q8VCZ8 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC26.97■■□□□ 1.91
Rpusd1Q8VCZ8 Gm27322-201ENSMUST00000184007 104 ntBASIC26.94■■□□□ 1.9
Rpusd1Q8VCZ8 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Rpusd1Q8VCZ8 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Rpusd1Q8VCZ8 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Rpusd1Q8VCZ8 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
Rpusd1Q8VCZ8 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Rpusd1Q8VCZ8 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Rpusd1Q8VCZ8 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC26.79■■□□□ 1.88
Rpusd1Q8VCZ8 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Rpusd1Q8VCZ8 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC26.74■■□□□ 1.87
Rpusd1Q8VCZ8 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Rpusd1Q8VCZ8 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Rpusd1Q8VCZ8 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Rpusd1Q8VCZ8 Gm24804-201ENSMUST00000174982 85 ntBASIC26.69■■□□□ 1.86
Rpusd1Q8VCZ8 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Rpusd1Q8VCZ8 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Rpusd1Q8VCZ8 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Rpusd1Q8VCZ8 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC26.62■■□□□ 1.85
Rpusd1Q8VCZ8 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC26.61■■□□□ 1.85
Rpusd1Q8VCZ8 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Rpusd1Q8VCZ8 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
Rpusd1Q8VCZ8 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
Rpusd1Q8VCZ8 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Rpusd1Q8VCZ8 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC26.54■■□□□ 1.84
Rpusd1Q8VCZ8 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Rpusd1Q8VCZ8 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
Rpusd1Q8VCZ8 AC166822.3-201ENSMUST00000227394 661 ntBASIC26.4■■□□□ 1.82
Rpusd1Q8VCZ8 AL845457.1-201ENSMUST00000197244 68 ntBASIC26.39■■□□□ 1.82
Rpusd1Q8VCZ8 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC26.39■■□□□ 1.82
Rpusd1Q8VCZ8 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Rpusd1Q8VCZ8 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Rpusd1Q8VCZ8 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Rpusd1Q8VCZ8 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Rpusd1Q8VCZ8 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
Rpusd1Q8VCZ8 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Rpusd1Q8VCZ8 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Rpusd1Q8VCZ8 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Rpusd1Q8VCZ8 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Rpusd1Q8VCZ8 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Rpusd1Q8VCZ8 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Rpusd1Q8VCZ8 Zfp131-207ENSMUST00000224946 1783 ntBASIC26.25■■□□□ 1.79
Rpusd1Q8VCZ8 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Rpusd1Q8VCZ8 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
Rpusd1Q8VCZ8 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Rpusd1Q8VCZ8 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
Rpusd1Q8VCZ8 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Rpusd1Q8VCZ8 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC26.18■■□□□ 1.78
Rpusd1Q8VCZ8 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Rpusd1Q8VCZ8 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Rpusd1Q8VCZ8 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
Rpusd1Q8VCZ8 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Rpusd1Q8VCZ8 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC26.07■■□□□ 1.76
Rpusd1Q8VCZ8 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Rpusd1Q8VCZ8 Zfp131-205ENSMUST00000223812 663 ntBASIC26.06■■□□□ 1.76
Rpusd1Q8VCZ8 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Rpusd1Q8VCZ8 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Rpusd1Q8VCZ8 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Rpusd1Q8VCZ8 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26■■□□□ 1.75
Rpusd1Q8VCZ8 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC26■■□□□ 1.75
Rpusd1Q8VCZ8 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Rpusd1Q8VCZ8 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Rpusd1Q8VCZ8 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Rpusd1Q8VCZ8 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
Rpusd1Q8VCZ8 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Rpusd1Q8VCZ8 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
Rpusd1Q8VCZ8 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Rpusd1Q8VCZ8 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Rpusd1Q8VCZ8 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
Rpusd1Q8VCZ8 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Rpusd1Q8VCZ8 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Rpusd1Q8VCZ8 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC25.8■■□□□ 1.72
Rpusd1Q8VCZ8 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Rpusd1Q8VCZ8 Gm16148-201ENSMUST00000119653 893 ntBASIC25.79■■□□□ 1.72
Rpusd1Q8VCZ8 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Rpusd1Q8VCZ8 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Rpusd1Q8VCZ8 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC25.79■■□□□ 1.72
Rpusd1Q8VCZ8 Mipep-204ENSMUST00000225043 1548 ntBASIC25.78■■□□□ 1.72
Rpusd1Q8VCZ8 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Rpusd1Q8VCZ8 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC25.77■■□□□ 1.72
Rpusd1Q8VCZ8 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
Rpusd1Q8VCZ8 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Rpusd1Q8VCZ8 Peli2-204ENSMUST00000226513 1320 ntBASIC25.76■■□□□ 1.71
Rpusd1Q8VCZ8 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC25.76■■□□□ 1.71
Rpusd1Q8VCZ8 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC25.75■■□□□ 1.71
Rpusd1Q8VCZ8 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Rpusd1Q8VCZ8 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC25.72■■□□□ 1.71
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms