Protein–RNA interactions for Protein: Q8R2A7

Vmn1r228, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r228Q8R2A7 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23,7■■□□□ 1,38
Vmn1r228Q8R2A7 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC23,67■■□□□ 1,38
Vmn1r228Q8R2A7 AC153911.1-202ENSMUST00000218534 1034 ntBASIC23,66■■□□□ 1,38
Vmn1r228Q8R2A7 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC23,66■■□□□ 1,38
Vmn1r228Q8R2A7 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23,65■■□□□ 1,38
Vmn1r228Q8R2A7 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC23,56■■□□□ 1,36
Vmn1r228Q8R2A7 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC23,56■■□□□ 1,36
Vmn1r228Q8R2A7 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC23,54■■□□□ 1,36
Vmn1r228Q8R2A7 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC23,53■■□□□ 1,36
Vmn1r228Q8R2A7 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23,53■■□□□ 1,36
Vmn1r228Q8R2A7 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC23,49■■□□□ 1,35
Vmn1r228Q8R2A7 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC23,48■■□□□ 1,35
Vmn1r228Q8R2A7 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC23,47■■□□□ 1,35
Vmn1r228Q8R2A7 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23,45■■□□□ 1,34
Vmn1r228Q8R2A7 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC23,35■■□□□ 1,33
Vmn1r228Q8R2A7 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC23,35■■□□□ 1,33
Vmn1r228Q8R2A7 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC23,33■■□□□ 1,33
Vmn1r228Q8R2A7 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23,33■■□□□ 1,33
Vmn1r228Q8R2A7 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC23,32■■□□□ 1,32
Vmn1r228Q8R2A7 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC23,29■■□□□ 1,32
Vmn1r228Q8R2A7 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC23,27■■□□□ 1,32
Vmn1r228Q8R2A7 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC23,25■■□□□ 1,31
Vmn1r228Q8R2A7 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC23,24■■□□□ 1,31
Vmn1r228Q8R2A7 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC23,23■■□□□ 1,31
Vmn1r228Q8R2A7 Gm2415-204ENSMUST00000190235 2004 ntBASIC23,21■■□□□ 1,31
Vmn1r228Q8R2A7 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23,18■■□□□ 1,3
Vmn1r228Q8R2A7 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC23,17■■□□□ 1,3
Vmn1r228Q8R2A7 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC23,17■■□□□ 1,3
Vmn1r228Q8R2A7 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23,15■■□□□ 1,3
Vmn1r228Q8R2A7 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC23,14■■□□□ 1,29
Vmn1r228Q8R2A7 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC23,12■■□□□ 1,29
Vmn1r228Q8R2A7 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC23,08■■□□□ 1,29
Vmn1r228Q8R2A7 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23,07■■□□□ 1,28
Vmn1r228Q8R2A7 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23,02■■□□□ 1,28
Vmn1r228Q8R2A7 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC23,01■■□□□ 1,27
Vmn1r228Q8R2A7 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1,27
Vmn1r228Q8R2A7 Gm6658-202ENSMUST00000209493 1885 ntBASIC22,99■■□□□ 1,27
Vmn1r228Q8R2A7 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC22,98■■□□□ 1,27
Vmn1r228Q8R2A7 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC22,98■■□□□ 1,27
Vmn1r228Q8R2A7 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22,97■■□□□ 1,27
Vmn1r228Q8R2A7 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC22,96■■□□□ 1,27
Vmn1r228Q8R2A7 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC22,95■■□□□ 1,26
Vmn1r228Q8R2A7 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC22,92■■□□□ 1,26
Vmn1r228Q8R2A7 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC22,91■■□□□ 1,26
Vmn1r228Q8R2A7 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC22,91■■□□□ 1,26
Vmn1r228Q8R2A7 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC22,91■■□□□ 1,26
Vmn1r228Q8R2A7 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22,89■■□□□ 1,25
Vmn1r228Q8R2A7 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22,89■■□□□ 1,25
Vmn1r228Q8R2A7 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC22,87■■□□□ 1,25
Vmn1r228Q8R2A7 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22,87■■□□□ 1,25
Vmn1r228Q8R2A7 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC22,87■■□□□ 1,25
Vmn1r228Q8R2A7 Zxda-201ENSMUST00000117281 2621 ntBASIC22,84■■□□□ 1,25
Vmn1r228Q8R2A7 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC22,83■■□□□ 1,25
Vmn1r228Q8R2A7 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC22,81■■□□□ 1,24
Vmn1r228Q8R2A7 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC22,81■■□□□ 1,24
Vmn1r228Q8R2A7 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC22,81■■□□□ 1,24
Vmn1r228Q8R2A7 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC22,79■■□□□ 1,24
Vmn1r228Q8R2A7 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22,77■■□□□ 1,24
Vmn1r228Q8R2A7 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22,77■■□□□ 1,23
Vmn1r228Q8R2A7 Gm9905-201ENSMUST00000065740 1845 ntBASIC22,76■■□□□ 1,23
Vmn1r228Q8R2A7 Gm27325-201ENSMUST00000175467 74 ntBASIC22,76■■□□□ 1,23
Vmn1r228Q8R2A7 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22,75■■□□□ 1,23
Vmn1r228Q8R2A7 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22,75■■□□□ 1,23
Vmn1r228Q8R2A7 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22,75■■□□□ 1,23
Vmn1r228Q8R2A7 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC22,74■■□□□ 1,23
Vmn1r228Q8R2A7 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22,73■■□□□ 1,23
Vmn1r228Q8R2A7 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC22,73■■□□□ 1,23
Vmn1r228Q8R2A7 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC22,73■■□□□ 1,23
Vmn1r228Q8R2A7 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22,72■■□□□ 1,23
Vmn1r228Q8R2A7 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC22,72■■□□□ 1,23
Vmn1r228Q8R2A7 Zfp131-207ENSMUST00000224946 1783 ntBASIC22,71■■□□□ 1,23
Vmn1r228Q8R2A7 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22,7■■□□□ 1,22
Vmn1r228Q8R2A7 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC22,68■■□□□ 1,22
Vmn1r228Q8R2A7 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22,67■■□□□ 1,22
Vmn1r228Q8R2A7 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC22,65■■□□□ 1,22
Vmn1r228Q8R2A7 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC22,64■■□□□ 1,22
Vmn1r228Q8R2A7 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC22,64■■□□□ 1,21
Vmn1r228Q8R2A7 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC22,63■■□□□ 1,21
Vmn1r228Q8R2A7 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC22,63■■□□□ 1,21
Vmn1r228Q8R2A7 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22,62■■□□□ 1,21
Vmn1r228Q8R2A7 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC22,61■■□□□ 1,21
Vmn1r228Q8R2A7 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22,6■■□□□ 1,21
Vmn1r228Q8R2A7 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC22,6■■□□□ 1,21
Vmn1r228Q8R2A7 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC22,6■■□□□ 1,21
Vmn1r228Q8R2A7 Gm6206-201ENSMUST00000133472 2199 ntBASIC22,6■■□□□ 1,21
Vmn1r228Q8R2A7 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC22,59■■□□□ 1,21
Vmn1r228Q8R2A7 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC22,57■■□□□ 1,2
Vmn1r228Q8R2A7 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC22,55■■□□□ 1,2
Vmn1r228Q8R2A7 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC22,54■■□□□ 1,2
Vmn1r228Q8R2A7 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC22,53■■□□□ 1,2
Vmn1r228Q8R2A7 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22,53■■□□□ 1,2
Vmn1r228Q8R2A7 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22,53■■□□□ 1,2
Vmn1r228Q8R2A7 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22,52■■□□□ 1,2
Vmn1r228Q8R2A7 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC22,52■■□□□ 1,2
Vmn1r228Q8R2A7 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22,52■■□□□ 1,2
Vmn1r228Q8R2A7 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC22,51■■□□□ 1,19
Vmn1r228Q8R2A7 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC22,5■■□□□ 1,19
Vmn1r228Q8R2A7 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC22,5■■□□□ 1,19
Vmn1r228Q8R2A7 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC22,49■■□□□ 1,19
Vmn1r228Q8R2A7 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22,48■■□□□ 1,19
Retrieved 100 of 76,532 protein–RNA pairs in 10,6 ms