Protein–RNA interactions for Protein: Q8R2A7

Vmn1r228, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r228Q8R2A7 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
Vmn1r228Q8R2A7 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
Vmn1r228Q8R2A7 AC153911.1-202ENSMUST00000218534 1034 ntBASIC23.66■■□□□ 1.38
Vmn1r228Q8R2A7 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC23.66■■□□□ 1.38
Vmn1r228Q8R2A7 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23.65■■□□□ 1.38
Vmn1r228Q8R2A7 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Vmn1r228Q8R2A7 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Vmn1r228Q8R2A7 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Vmn1r228Q8R2A7 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
Vmn1r228Q8R2A7 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Vmn1r228Q8R2A7 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Vmn1r228Q8R2A7 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Vmn1r228Q8R2A7 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Vmn1r228Q8R2A7 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
Vmn1r228Q8R2A7 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Vmn1r228Q8R2A7 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Vmn1r228Q8R2A7 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Vmn1r228Q8R2A7 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23.33■■□□□ 1.33
Vmn1r228Q8R2A7 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Vmn1r228Q8R2A7 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
Vmn1r228Q8R2A7 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Vmn1r228Q8R2A7 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Vmn1r228Q8R2A7 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC23.24■■□□□ 1.31
Vmn1r228Q8R2A7 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC23.23■■□□□ 1.31
Vmn1r228Q8R2A7 Gm2415-204ENSMUST00000190235 2004 ntBASIC23.21■■□□□ 1.31
Vmn1r228Q8R2A7 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Vmn1r228Q8R2A7 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC23.17■■□□□ 1.3
Vmn1r228Q8R2A7 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC23.17■■□□□ 1.3
Vmn1r228Q8R2A7 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Vmn1r228Q8R2A7 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
Vmn1r228Q8R2A7 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Vmn1r228Q8R2A7 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Vmn1r228Q8R2A7 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Vmn1r228Q8R2A7 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Vmn1r228Q8R2A7 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Vmn1r228Q8R2A7 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Vmn1r228Q8R2A7 Gm6658-202ENSMUST00000209493 1885 ntBASIC22.99■■□□□ 1.27
Vmn1r228Q8R2A7 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Vmn1r228Q8R2A7 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
Vmn1r228Q8R2A7 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Vmn1r228Q8R2A7 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Vmn1r228Q8R2A7 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Vmn1r228Q8R2A7 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Vmn1r228Q8R2A7 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Vmn1r228Q8R2A7 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Vmn1r228Q8R2A7 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Vmn1r228Q8R2A7 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Vmn1r228Q8R2A7 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.25
Vmn1r228Q8R2A7 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Vmn1r228Q8R2A7 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Vmn1r228Q8R2A7 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Vmn1r228Q8R2A7 Zxda-201ENSMUST00000117281 2621 ntBASIC22.84■■□□□ 1.25
Vmn1r228Q8R2A7 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC22.83■■□□□ 1.25
Vmn1r228Q8R2A7 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Vmn1r228Q8R2A7 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Vmn1r228Q8R2A7 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Vmn1r228Q8R2A7 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Vmn1r228Q8R2A7 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Vmn1r228Q8R2A7 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.23
Vmn1r228Q8R2A7 Gm9905-201ENSMUST00000065740 1845 ntBASIC22.76■■□□□ 1.23
Vmn1r228Q8R2A7 Gm27325-201ENSMUST00000175467 74 ntBASIC22.76■■□□□ 1.23
Vmn1r228Q8R2A7 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Vmn1r228Q8R2A7 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Vmn1r228Q8R2A7 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
Vmn1r228Q8R2A7 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
Vmn1r228Q8R2A7 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Vmn1r228Q8R2A7 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Vmn1r228Q8R2A7 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Vmn1r228Q8R2A7 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Vmn1r228Q8R2A7 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Vmn1r228Q8R2A7 Zfp131-207ENSMUST00000224946 1783 ntBASIC22.71■■□□□ 1.23
Vmn1r228Q8R2A7 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.7■■□□□ 1.22
Vmn1r228Q8R2A7 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Vmn1r228Q8R2A7 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Vmn1r228Q8R2A7 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Vmn1r228Q8R2A7 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Vmn1r228Q8R2A7 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Vmn1r228Q8R2A7 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Vmn1r228Q8R2A7 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
Vmn1r228Q8R2A7 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.62■■□□□ 1.21
Vmn1r228Q8R2A7 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
Vmn1r228Q8R2A7 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22.6■■□□□ 1.21
Vmn1r228Q8R2A7 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Vmn1r228Q8R2A7 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Vmn1r228Q8R2A7 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.6■■□□□ 1.21
Vmn1r228Q8R2A7 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Vmn1r228Q8R2A7 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Vmn1r228Q8R2A7 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC22.55■■□□□ 1.2
Vmn1r228Q8R2A7 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Vmn1r228Q8R2A7 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Vmn1r228Q8R2A7 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Vmn1r228Q8R2A7 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Vmn1r228Q8R2A7 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Vmn1r228Q8R2A7 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC22.52■■□□□ 1.2
Vmn1r228Q8R2A7 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Vmn1r228Q8R2A7 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Vmn1r228Q8R2A7 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Vmn1r228Q8R2A7 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Vmn1r228Q8R2A7 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Vmn1r228Q8R2A7 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 8.7 ms