Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC27.71■■■□□ 2.03
Zcchc9Q8R1J3 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Zcchc9Q8R1J3 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Zcchc9Q8R1J3 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
Zcchc9Q8R1J3 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Zcchc9Q8R1J3 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC27.58■■■□□ 2.01
Zcchc9Q8R1J3 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC27.57■■■□□ 2
Zcchc9Q8R1J3 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC27.56■■■□□ 2
Zcchc9Q8R1J3 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Zcchc9Q8R1J3 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Zcchc9Q8R1J3 Gm27322-201ENSMUST00000184007 104 ntBASIC27.54■■■□□ 2
Zcchc9Q8R1J3 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC27.54■■■□□ 2
Zcchc9Q8R1J3 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Zcchc9Q8R1J3 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.49■■□□□ 1.99
Zcchc9Q8R1J3 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Zcchc9Q8R1J3 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC27.47■■□□□ 1.99
Zcchc9Q8R1J3 Gm42596-201ENSMUST00000196305 1958 ntBASIC27.44■■□□□ 1.98
Zcchc9Q8R1J3 Gm24804-201ENSMUST00000174982 85 ntBASIC27.42■■□□□ 1.98
Zcchc9Q8R1J3 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Zcchc9Q8R1J3 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC27.41■■□□□ 1.98
Zcchc9Q8R1J3 CT025624.2-201ENSMUST00000223609 1909 ntBASIC27.4■■□□□ 1.98
Zcchc9Q8R1J3 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Zcchc9Q8R1J3 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.97
Zcchc9Q8R1J3 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
Zcchc9Q8R1J3 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Zcchc9Q8R1J3 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC27.3■■□□□ 1.96
Zcchc9Q8R1J3 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Zcchc9Q8R1J3 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27.23■■□□□ 1.95
Zcchc9Q8R1J3 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Zcchc9Q8R1J3 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Zcchc9Q8R1J3 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Zcchc9Q8R1J3 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Zcchc9Q8R1J3 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC27.11■■□□□ 1.93
Zcchc9Q8R1J3 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Zcchc9Q8R1J3 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27.05■■□□□ 1.92
Zcchc9Q8R1J3 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Zcchc9Q8R1J3 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC27.01■■□□□ 1.91
Zcchc9Q8R1J3 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Zcchc9Q8R1J3 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC26.96■■□□□ 1.91
Zcchc9Q8R1J3 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC26.95■■□□□ 1.91
Zcchc9Q8R1J3 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC26.95■■□□□ 1.91
Zcchc9Q8R1J3 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Zcchc9Q8R1J3 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Zcchc9Q8R1J3 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Zcchc9Q8R1J3 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
Zcchc9Q8R1J3 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
Zcchc9Q8R1J3 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Zcchc9Q8R1J3 AC166822.3-201ENSMUST00000227394 661 ntBASIC26.87■■□□□ 1.89
Zcchc9Q8R1J3 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Zcchc9Q8R1J3 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Zcchc9Q8R1J3 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC26.86■■□□□ 1.89
Zcchc9Q8R1J3 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Zcchc9Q8R1J3 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Zcchc9Q8R1J3 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC26.84■■□□□ 1.89
Zcchc9Q8R1J3 Zfp131-205ENSMUST00000223812 663 ntBASIC26.82■■□□□ 1.88
Zcchc9Q8R1J3 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Zcchc9Q8R1J3 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Zcchc9Q8R1J3 AL845457.1-201ENSMUST00000197244 68 ntBASIC26.81■■□□□ 1.88
Zcchc9Q8R1J3 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
Zcchc9Q8R1J3 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Zcchc9Q8R1J3 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Zcchc9Q8R1J3 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Zcchc9Q8R1J3 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC26.7■■□□□ 1.87
Zcchc9Q8R1J3 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Zcchc9Q8R1J3 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC26.67■■□□□ 1.86
Zcchc9Q8R1J3 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Zcchc9Q8R1J3 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Zcchc9Q8R1J3 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC26.65■■□□□ 1.86
Zcchc9Q8R1J3 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.86
Zcchc9Q8R1J3 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Zcchc9Q8R1J3 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Zcchc9Q8R1J3 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Zcchc9Q8R1J3 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Zcchc9Q8R1J3 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC26.52■■□□□ 1.84
Zcchc9Q8R1J3 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Zcchc9Q8R1J3 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Zcchc9Q8R1J3 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
Zcchc9Q8R1J3 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Zcchc9Q8R1J3 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
Zcchc9Q8R1J3 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Zcchc9Q8R1J3 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
Zcchc9Q8R1J3 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Zcchc9Q8R1J3 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Zcchc9Q8R1J3 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Zcchc9Q8R1J3 Gm16148-201ENSMUST00000119653 893 ntBASIC26.38■■□□□ 1.81
Zcchc9Q8R1J3 Zfp131-207ENSMUST00000224946 1783 ntBASIC26.36■■□□□ 1.81
Zcchc9Q8R1J3 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC26.36■■□□□ 1.81
Zcchc9Q8R1J3 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
Zcchc9Q8R1J3 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Zcchc9Q8R1J3 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
Zcchc9Q8R1J3 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Zcchc9Q8R1J3 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Zcchc9Q8R1J3 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Zcchc9Q8R1J3 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Zcchc9Q8R1J3 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Zcchc9Q8R1J3 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Zcchc9Q8R1J3 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Zcchc9Q8R1J3 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Zcchc9Q8R1J3 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Zcchc9Q8R1J3 Peli2-204ENSMUST00000226513 1320 ntBASIC26.2■■□□□ 1.79
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms