Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hist3h2bbQ8CGP0 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hist3h2bbQ8CGP0 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.98■□□□□ 0.95
Hist3h2bbQ8CGP0 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Hist3h2bbQ8CGP0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC20.95■□□□□ 0.94
Hist3h2bbQ8CGP0 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hist3h2bbQ8CGP0 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hist3h2bbQ8CGP0 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hist3h2bbQ8CGP0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hist3h2bbQ8CGP0 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Hist3h2bbQ8CGP0 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hist3h2bbQ8CGP0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC20.79■□□□□ 0.92
Hist3h2bbQ8CGP0 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hist3h2bbQ8CGP0 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hist3h2bbQ8CGP0 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Hist3h2bbQ8CGP0 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hist3h2bbQ8CGP0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hist3h2bbQ8CGP0 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hist3h2bbQ8CGP0 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hist3h2bbQ8CGP0 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.71■□□□□ 0.91
Hist3h2bbQ8CGP0 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hist3h2bbQ8CGP0 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hist3h2bbQ8CGP0 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hist3h2bbQ8CGP0 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Hist3h2bbQ8CGP0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hist3h2bbQ8CGP0 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Hist3h2bbQ8CGP0 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hist3h2bbQ8CGP0 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.62■□□□□ 0.89
Hist3h2bbQ8CGP0 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Hist3h2bbQ8CGP0 Gm2415-204ENSMUST00000190235 2004 ntBASIC20.59■□□□□ 0.89
Hist3h2bbQ8CGP0 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Hist3h2bbQ8CGP0 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hist3h2bbQ8CGP0 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hist3h2bbQ8CGP0 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hist3h2bbQ8CGP0 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Hist3h2bbQ8CGP0 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hist3h2bbQ8CGP0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hist3h2bbQ8CGP0 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.56■□□□□ 0.88
Hist3h2bbQ8CGP0 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Hist3h2bbQ8CGP0 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hist3h2bbQ8CGP0 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hist3h2bbQ8CGP0 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Hist3h2bbQ8CGP0 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hist3h2bbQ8CGP0 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Hist3h2bbQ8CGP0 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hist3h2bbQ8CGP0 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hist3h2bbQ8CGP0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hist3h2bbQ8CGP0 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hist3h2bbQ8CGP0 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hist3h2bbQ8CGP0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hist3h2bbQ8CGP0 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hist3h2bbQ8CGP0 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.4■□□□□ 0.86
Hist3h2bbQ8CGP0 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hist3h2bbQ8CGP0 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Hist3h2bbQ8CGP0 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
Hist3h2bbQ8CGP0 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.37■□□□□ 0.85
Hist3h2bbQ8CGP0 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hist3h2bbQ8CGP0 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hist3h2bbQ8CGP0 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hist3h2bbQ8CGP0 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Hist3h2bbQ8CGP0 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Hist3h2bbQ8CGP0 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hist3h2bbQ8CGP0 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hist3h2bbQ8CGP0 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hist3h2bbQ8CGP0 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hist3h2bbQ8CGP0 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hist3h2bbQ8CGP0 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Hist3h2bbQ8CGP0 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Hist3h2bbQ8CGP0 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC20.26■□□□□ 0.83
Hist3h2bbQ8CGP0 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hist3h2bbQ8CGP0 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hist3h2bbQ8CGP0 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hist3h2bbQ8CGP0 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Hist3h2bbQ8CGP0 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Hist3h2bbQ8CGP0 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.2■□□□□ 0.82
Hist3h2bbQ8CGP0 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hist3h2bbQ8CGP0 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hist3h2bbQ8CGP0 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hist3h2bbQ8CGP0 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hist3h2bbQ8CGP0 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hist3h2bbQ8CGP0 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hist3h2bbQ8CGP0 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hist3h2bbQ8CGP0 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Hist3h2bbQ8CGP0 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hist3h2bbQ8CGP0 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hist3h2bbQ8CGP0 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hist3h2bbQ8CGP0 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hist3h2bbQ8CGP0 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hist3h2bbQ8CGP0 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hist3h2bbQ8CGP0 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Hist3h2bbQ8CGP0 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Hist3h2bbQ8CGP0 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Hist3h2bbQ8CGP0 Gm15042-201ENSMUST00000120212 883 ntBASIC20.07■□□□□ 0.8
Hist3h2bbQ8CGP0 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hist3h2bbQ8CGP0 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Hist3h2bbQ8CGP0 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hist3h2bbQ8CGP0 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hist3h2bbQ8CGP0 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Hist3h2bbQ8CGP0 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hist3h2bbQ8CGP0 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms