Protein–RNA interactions for Protein: Q8CFI2

Cdc34, Ubiquitin-conjugating enzyme E2 R1, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc34Q8CFI2 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
Cdc34Q8CFI2 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cdc34Q8CFI2 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cdc34Q8CFI2 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Cdc34Q8CFI2 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cdc34Q8CFI2 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cdc34Q8CFI2 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Cdc34Q8CFI2 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.68■■□□□ 1.06
Cdc34Q8CFI2 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Cdc34Q8CFI2 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Cdc34Q8CFI2 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cdc34Q8CFI2 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.57■■□□□ 1.04
Cdc34Q8CFI2 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Cdc34Q8CFI2 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cdc34Q8CFI2 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.52■■□□□ 1.04
Cdc34Q8CFI2 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cdc34Q8CFI2 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cdc34Q8CFI2 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cdc34Q8CFI2 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cdc34Q8CFI2 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Cdc34Q8CFI2 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Cdc34Q8CFI2 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cdc34Q8CFI2 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cdc34Q8CFI2 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC21.38■■□□□ 1.01
Cdc34Q8CFI2 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cdc34Q8CFI2 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC21.36■■□□□ 1.01
Cdc34Q8CFI2 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cdc34Q8CFI2 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC21.31■■□□□ 1
Cdc34Q8CFI2 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.29■■□□□ 1
Cdc34Q8CFI2 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cdc34Q8CFI2 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Cdc34Q8CFI2 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cdc34Q8CFI2 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdc34Q8CFI2 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC21.25■□□□□ 0.99
Cdc34Q8CFI2 Gm2415-204ENSMUST00000190235 2004 ntBASIC21.23■□□□□ 0.99
Cdc34Q8CFI2 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cdc34Q8CFI2 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cdc34Q8CFI2 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cdc34Q8CFI2 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cdc34Q8CFI2 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cdc34Q8CFI2 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.98
Cdc34Q8CFI2 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Cdc34Q8CFI2 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cdc34Q8CFI2 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cdc34Q8CFI2 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cdc34Q8CFI2 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cdc34Q8CFI2 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cdc34Q8CFI2 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cdc34Q8CFI2 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cdc34Q8CFI2 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.03■□□□□ 0.96
Cdc34Q8CFI2 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cdc34Q8CFI2 Gm27325-201ENSMUST00000175467 74 ntBASIC21.02■□□□□ 0.96
Cdc34Q8CFI2 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cdc34Q8CFI2 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cdc34Q8CFI2 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Cdc34Q8CFI2 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cdc34Q8CFI2 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cdc34Q8CFI2 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cdc34Q8CFI2 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdc34Q8CFI2 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cdc34Q8CFI2 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cdc34Q8CFI2 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cdc34Q8CFI2 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cdc34Q8CFI2 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cdc34Q8CFI2 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Cdc34Q8CFI2 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdc34Q8CFI2 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdc34Q8CFI2 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cdc34Q8CFI2 Zfp131-207ENSMUST00000224946 1783 ntBASIC20.87■□□□□ 0.93
Cdc34Q8CFI2 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdc34Q8CFI2 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cdc34Q8CFI2 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cdc34Q8CFI2 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.84■□□□□ 0.93
Cdc34Q8CFI2 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cdc34Q8CFI2 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cdc34Q8CFI2 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Cdc34Q8CFI2 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cdc34Q8CFI2 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC20.78■□□□□ 0.92
Cdc34Q8CFI2 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cdc34Q8CFI2 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cdc34Q8CFI2 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cdc34Q8CFI2 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cdc34Q8CFI2 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdc34Q8CFI2 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.73■□□□□ 0.91
Cdc34Q8CFI2 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.71■□□□□ 0.91
Cdc34Q8CFI2 Zxda-201ENSMUST00000117281 2621 ntBASIC20.7■□□□□ 0.9
Cdc34Q8CFI2 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdc34Q8CFI2 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cdc34Q8CFI2 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdc34Q8CFI2 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdc34Q8CFI2 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdc34Q8CFI2 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdc34Q8CFI2 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdc34Q8CFI2 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.68■□□□□ 0.9
Cdc34Q8CFI2 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdc34Q8CFI2 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cdc34Q8CFI2 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdc34Q8CFI2 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdc34Q8CFI2 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdc34Q8CFI2 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms